; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020675 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020675
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein CONSTANS-LIKE 14-like
Genome locationscaffold375:2104583..2105497
RNA-Seq ExpressionMS020675
SyntenyMS020675
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570739.1 Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]4.4e-5183.59Show/hide
Query:  FKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE
        FK   WQ+  QRAESPVSCESSITIEG+SRACRYSPEEKKERIERY++KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND+V KN P+QWS   +EE
Subjt:  FKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE

Query:  EEEEEA-NGGDNWIKYFMDAY-SANLIP
        EEEEEA NGG+NWIKYF+DAY SANLIP
Subjt:  EEEEEA-NGGDNWIKYFMDAY-SANLIP

KAG7035439.1 Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-5185.04Show/hide
Query:  GLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE----
        G +Q+ NQRAESPVSCESSI IEGMSRACRYSPEEKKERI+RYR+KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDV KNYP QW SHG+E    
Subjt:  GLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE----

Query:  EEEEEEANGGDNWIKYFMDAYSANLIP
        EEEEEEAN  DNWIKYF+DAYS NLIP
Subjt:  EEEEEEANGGDNWIKYFMDAYSANLIP

XP_022146112.1 uncharacterized protein LOC111015406 [Momordica charantia]5.7e-5999.17Show/hide
Query:  KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGR-EEEEEEEA
        KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGR EEEEEEEA
Subjt:  KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGR-EEEEEEEA

Query:  NGGDNWIKYFMDAYSANLIP
        NGGDNWIKYFMDAYSANLIP
Subjt:  NGGDNWIKYFMDAYSANLIP

XP_023532290.1 two-component response regulator-like PRR1 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-5185.83Show/hide
Query:  GLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE----
        G +Q+ NQRAESPVSCESSI IEGMSRACRYSPEEKKERI+RYR+KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDV KNYPVQW SHG+E    
Subjt:  GLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE----

Query:  EEEEEEANGGDNWIKYFMDAYSANLIP
        EEEEEEAN  DNWIKYF+DAYS NLIP
Subjt:  EEEEEEANGGDNWIKYFMDAYSANLIP

XP_038902180.1 zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]4.7e-5387.4Show/hide
Query:  LFKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE
        LF  G +Q+ NQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYP+QW SHG+E
Subjt:  LFKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE

Query:  EEEEEEANGGDNWIKYFMDAYSANLIP
        EE+E   N GDNWIKYF+DAYS NLIP
Subjt:  EEEEEEANGGDNWIKYFMDAYSANLIP

TrEMBL top hitse value%identityAlignment
A0A6J1CYP0 uncharacterized protein LOC1110154062.8e-5999.17Show/hide
Query:  KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGR-EEEEEEEA
        KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGR EEEEEEEA
Subjt:  KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGR-EEEEEEEA

Query:  NGGDNWIKYFMDAYSANLIP
        NGGDNWIKYFMDAYSANLIP
Subjt:  NGGDNWIKYFMDAYSANLIP

A0A6J1FXW4 uncharacterized protein LOC111448769 isoform X13.6e-5183.59Show/hide
Query:  FKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE
        FK   WQ+  QRAESPVSCESSITIEG+SRACRYSPEEKKERIERY++KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND+V KN P+QWS   +EE
Subjt:  FKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE

Query:  EEEEEA-NGGDNWIKYFMDAY-SANLIP
        EEEEEA NGG+NWIKYF+DAY SANLIP
Subjt:  EEEEEA-NGGDNWIKYFMDAY-SANLIP

A0A6J1G5H7 zinc finger protein CONSTANS-LIKE 14-like1.0e-5084.8Show/hide
Query:  WQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE----EE
        +Q+ NQRAESPVSCESSI IEGMSRACRYSPEEKKERI+RYR+KRNQRNFNKKIKYACRKSLADSRPRIRGRFA+YNDDV KNYP QW SHG+E    EE
Subjt:  WQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGRE----EE

Query:  EEEEANGGDNWIKYFMDAYSANLIP
        EEEEAN  DNWIKYF+DAYS NLIP
Subjt:  EEEEANGGDNWIKYFMDAYSANLIP

A0A6J1JHZ7 uncharacterized protein LOC111484524 isoform X12.8e-5182.81Show/hide
Query:  FKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE
        FK   WQ+  QRAESPVSCESSITIEG+SRACRYSPEEKKERIERY++KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND+V KN+P++WS   +EE
Subjt:  FKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE

Query:  EEEEEA-NGGDNWIKYFMDAY-SANLIP
        EEEEEA NGG+NWIKYF+DAY SANLIP
Subjt:  EEEEEA-NGGDNWIKYFMDAY-SANLIP

A0A6J1L4M8 two-component response regulator-like PRR11.0e-5084.92Show/hide
Query:  GLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE---
        G +Q+ NQRAESPVSCESSI I+GMSRACRYSPEEKKERI+RYR+KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYN DV KNYPVQW SHG+EE   
Subjt:  GLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREE---

Query:  EEEEEANGGDNWIKYFMDAYSANLIP
        EEEEEAN  DNWIKYF+DAYS NLIP
Subjt:  EEEEEANGGDNWIKYFMDAYSANLIP

SwissProt top hitse value%identityAlignment
O50055 Zinc finger protein CONSTANS-LIKE 15.8e-0651.02Show/hide
Query:  SPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND
        SP +++ R+ RYR K+  R F K I+YA RK+ A+ RPRI+GRFA+  D
Subjt:  SPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND

Q940T9 Zinc finger protein CONSTANS-LIKE 42.6e-0649.12Show/hide
Query:  GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND
        G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Subjt:  GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND

Q9FHH8 Zinc finger protein CONSTANS-LIKE 52.6e-0639.02Show/hide
Query:  SSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFAR----YNDDVVKNYPVQWSSHGR
        S+IT        + S  +++ R+ RYR KR  R F K I+YA RK+ A+SRPRI+GRFA+     NDD+  ++    ++H +
Subjt:  SSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFAR----YNDDVVKNYPVQWSSHGR

Q9LKL2 Two-component response regulator-like APRR14.4e-0642.11Show/hide
Query:  EEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDV---VKNYP--VQWSSHGREEEEEEEAN
        + ++E + ++R KRNQR F+KKI+Y  RK LA+ RPR++G+F R  + V   +   P    +     EEEEEEE N
Subjt:  EEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDV---VKNYP--VQWSSHGREEEEEEEAN

Q9SK53 Zinc finger protein CONSTANS-LIKE 38.9e-0752.83Show/hide
Query:  ACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND
        A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Subjt:  ACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND

Arabidopsis top hitse value%identityAlignment
AT1G63820.1 CCT motif family protein1.5e-1755.79Show/hide
Query:  SPVSCESSITI-----EGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEE
        SP++ ESS T      E   R  RYS EE+KE+I +YR KR QRNF K IKYACRK+LAD+RPR+RGRFAR ND+V +N P   SS  R+E +++
Subjt:  SPVSCESSITI-----EGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEE

AT2G33350.1 CCT motif family protein9.8e-1755.84Show/hide
Query:  MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEE
        +++  + SPE++KE+I RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ ND+  +     +SSH  +E+E++
Subjt:  MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEE

AT3G12890.1 activator of spomin::LUC25.7e-1744.92Show/hide
Query:  ESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEEEANGG----------
        E  I  E  ++  RYS EE+K+RI RY  K+NQRNFNK IKY CRK+LAD R R+RGRFAR N+D  +  P    +H    E+EE+   G          
Subjt:  ESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEEEANGG----------

Query:  -DNWIKYFMDAYSANLIP
         D W+   M    +NLIP
Subjt:  -DNWIKYFMDAYSANLIP

AT5G41380.1 CCT motif family protein2.6e-1750.49Show/hide
Query:  QKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQ------WSSHGREE
        Q+ ++ +  P S E +  +       RYS EE+KE+I +YR KRNQRNF K IKYACRK+LADSRPRIRGRFAR ND+VV+   ++      W   G  E
Subjt:  QKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQ------WSSHGREE

Query:  EEE
        +EE
Subjt:  EEE

AT5G59990.1 CCT motif family protein1.8e-2353.45Show/hide
Query:  KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEEEAN
        + ++R  S V  ES+  IEGMS+A +YSPEEKKE+IE+YR+KRN RNFNK+IKY CRK+LADSRPRIRGRFAR ND++        S   + +  E    
Subjt:  KKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEEEAN

Query:  GGDNWIKYFMDAYSAN
          D W   F+D++SAN
Subjt:  GGDNWIKYFMDAYSAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTTAAAAATGGGTTATGGCAGAAGAAGAATCAGAGAGCAGAGAGTCCAGTTTCTTGTGAAAGTAGCATCACCATTGAAGGGATGAGCAGAGCATGTCGGTACAGTCC
AGAGGAGAAGAAGGAAAGAATTGAAAGATATAGAACAAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCGTTGGCCGACAGTCGACCAC
GGATCAGAGGAAGATTTGCAAGGTACAACGACGACGTCGTGAAGAATTATCCAGTGCAATGGAGTAGTCATGGGCGAGAGGAGGAGGAAGAAGAAGAGGCAAATGGTGGT
GATAATTGGATCAAGTATTTTATGGATGCATATTCTGCGAACCTTATTCCA
mRNA sequenceShow/hide mRNA sequence
TTGTTTAAAAATGGGTTATGGCAGAAGAAGAATCAGAGAGCAGAGAGTCCAGTTTCTTGTGAAAGTAGCATCACCATTGAAGGGATGAGCAGAGCATGTCGGTACAGTCC
AGAGGAGAAGAAGGAAAGAATTGAAAGATATAGAACAAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCGTTGGCCGACAGTCGACCAC
GGATCAGAGGAAGATTTGCAAGGTACAACGACGACGTCGTGAAGAATTATCCAGTGCAATGGAGTAGTCATGGGCGAGAGGAGGAGGAAGAAGAAGAGGCAAATGGTGGT
GATAATTGGATCAAGTATTTTATGGATGCATATTCTGCGAACCTTATTCCA
Protein sequenceShow/hide protein sequence
LFKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEEEANGG
DNWIKYFMDAYSANLIP