; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020687 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020687
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold375:2215626..2216228
RNA-Seq ExpressionMS020687
SyntenyMS020687
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570731.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia]8.1e-7673.3Show/hide
Query:  MPSSPPPPP---PVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGS
        MPSSPPPPP   PVPDYS WSP SIS I +VCI+ LLLSNYRILKR C VLHG+   R    F+ENPND SP++H  GL+AS IRLLPISQFKKN EA S
Subjt:  MPSSPPPPP---PVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGS

Query:  PASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELR
         ASINTECAVCLG+FEEGELIK+LPNCNHSFHSSCID+W RNHSSCPLCR HV + S D  +P+S+SAMLETLGRED+ RE    YQT+RAQILQ+ ELR
Subjt:  PASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELR

Query:  RDASDQ
        RDAS Q
Subjt:  RDASDQ

XP_008448367.1 PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo]7.6e-7472.41Show/hide
Query:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS
        MPSSPPPP PVPDYS WSP SISTIV+VC+IFLLLSNYR+LK+LC VLH +   RP   FEENPN+ S QIH  GL+ SMIRLLPISQFKK  E+ S  S
Subjt:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS

Query:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA
         NTECAVCLG+FEEGELIK+LPNCNHSFHSSCID+WFR+HSSCPLCR  V  FS    +P+S+SAMLETLGRE+ILRE    YQT+RAQILQ  E RRD 
Subjt:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA

Query:  SDQ
        S Q
Subjt:  SDQ

XP_023512261.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]3.4e-7471.84Show/hide
Query:  MPSSPPPPP---PVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGS
        MPSSPPPPP   PVPDYS WSP SIS I +VCI+ LLLSNYRILKR C V HG+   R    F+ENPND SPQ+H  GL+AS IRLLPISQFKKN EA S
Subjt:  MPSSPPPPP---PVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGS

Query:  PASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDI--LREGDYQTIRAQILQSSELR
         ASINTECAVCLG+FEEGELIK+LPNCNHSFHSSCID+W RNHSSCPLCR HV + S D  +P+S+SAMLETL RED+   R   YQT+RAQILQ+ +LR
Subjt:  PASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDI--LREGDYQTIRAQILQSSELR

Query:  RDASDQ
        RDAS Q
Subjt:  RDASDQ

XP_031743630.1 RING-H2 finger protein ATL52-like [Cucumis sativus]1.1e-7775.37Show/hide
Query:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS
        MPSSPPPP PVPDYS WSP SISTIVVVCI+FLLLSNYR+LK+LC VLHG+   RP   FEENPN+ S QIHG GL+ SMIRLLPISQFKKN E+ S  S
Subjt:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS

Query:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA
         NTECAVCLG+FEEGELIKHLPNCNHSFHS CID+WFRNHSSCPLCR  VL FS   T  +S+SAMLETLGRE++LRE    YQT+RAQILQ  E RRDA
Subjt:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA

Query:  SDQ
        S Q
Subjt:  SDQ

XP_034689191.1 RING-H2 finger protein ATL52-like [Vitis riparia]9.3e-4048.21Show/hide
Query:  PPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIF---CRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTE
        P P   +  WS   I  IV      LL + YRI+K++C+  HG  F    + +   E NP+D S Q H  GLD+S +  LPI+QFKKN     P+  NT+
Subjt:  PPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIF---CRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTE

Query:  CAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRD
        CAVCLG+FEEGE +KHLPNC+H FH  CID+WF +HS+CPLCRSHV DF+ D     S   +LETL RED  +E   +YQ +R +ILQ+S  R++
Subjt:  CAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRD

TrEMBL top hitse value%identityAlignment
A0A0A0KCA5 RING-type E3 ubiquitin transferase5.5e-7875.37Show/hide
Query:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS
        MPSSPPPP PVPDYS WSP SISTIVVVCI+FLLLSNYR+LK+LC VLHG+   RP   FEENPN+ S QIHG GL+ SMIRLLPISQFKKN E+ S  S
Subjt:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS

Query:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA
         NTECAVCLG+FEEGELIKHLPNCNHSFHS CID+WFRNHSSCPLCR  VL FS   T  +S+SAMLETLGRE++LRE    YQT+RAQILQ  E RRDA
Subjt:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA

Query:  SDQ
        S Q
Subjt:  SDQ

A0A1S3BIX6 RING-type E3 ubiquitin transferase3.7e-7472.41Show/hide
Query:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS
        MPSSPPPP PVPDYS WSP SISTIV+VC+IFLLLSNYR+LK+LC VLH +   RP   FEENPN+ S QIH  GL+ SMIRLLPISQFKK  E+ S  S
Subjt:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS

Query:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA
         NTECAVCLG+FEEGELIK+LPNCNHSFHSSCID+WFR+HSSCPLCR  V  FS    +P+S+SAMLETLGRE+ILRE    YQT+RAQILQ  E RRD 
Subjt:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA

Query:  SDQ
        S Q
Subjt:  SDQ

A0A2C9W1B6 RING-type E3 ubiquitin transferase2.1e-3747.5Show/hide
Query:  MPSSPPPPPP--VPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF----EENPNDASPQIHGDGLDASMIRLLPISQFKKNVE
        MP SP P  P  + +YS W+   I  ++ VC   +L S YR+L+RLC  L+     R RA      + N  D+S Q +  GL+++++R LPISQFKK  E
Subjt:  MPSSPPPPPP--VPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF----EENPNDASPQIHGDGLDASMIRLLPISQFKKNVE

Query:  AGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSS
          S AS N ECAVCLG+FEEGE +KHLPNC H FH +CID+WF+ HS+CPLCRSHV D   +++   S   +L TL RED   E    YQ +R++IL++S
Subjt:  AGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSS

A0A438G1M9 E3 ubiquitin-protein ligase7.2e-3851.22Show/hide
Query:  RILKRLCHVLHGVIF---CRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDS
        RI+K++C+  +G  F      +   E NP+D S Q H  GLD+S + LLPI+QFKKN     P+  NT+CAVCLG+FEEGE +KHLPNC+H FH  CID+
Subjt:  RILKRLCHVLHGVIF---CRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDS

Query:  WFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRD
        WF +HS+CPLCRSHV DF+ D     S   +LETL RED  +E   +YQ +R +ILQ+S  R++
Subjt:  WFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRD

A0A5A7V3S2 RING-type E3 ubiquitin transferase3.7e-7472.41Show/hide
Query:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS
        MPSSPPPP PVPDYS WSP SISTIV+VC+IFLLLSNYR+LK+LC VLH +   RP   FEENPN+ S QIH  GL+ SMIRLLPISQFKK  E+ S  S
Subjt:  MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPAS

Query:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA
         NTECAVCLG+FEEGELIK+LPNCNHSFHSSCID+WFR+HSSCPLCR  V  FS    +P+S+SAMLETLGRE+ILRE    YQT+RAQILQ  E RRD 
Subjt:  INTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE--GDYQTIRAQILQSSELRRDA

Query:  SDQ
        S Q
Subjt:  SDQ

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL11.7e-2037.22Show/hide
Query:  PPPPPVPDYSGWSP--------------LSISTIVVVCIIFLLLSNYRILKRLCHVLHGV-IFCRPRAHFEENP-NDASPQIHGDGLDASMIRLLPISQF
        PPPPP P  +  SP              L+I+ I ++   FLL+S Y  + + C   H + IF R R   ++NP    SP     GLD S IR +P+ +F
Subjt:  PPPPPVPDYSGWSP--------------LSISTIVVVCIIFLLLSNYRILKRLCHVLHGV-IFCRPRAHFEENP-NDASPQIHGDGLDASMIRLLPISQF

Query:  KK-NVEAG--SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV---LDFSADFTSPNSA
        KK +V AG    +  + EC+VCL +F+E E ++ +PNC H FH  CID W + +++CPLCR+ V     F+ D  S  S+
Subjt:  KK-NVEAG--SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV---LDFSADFTSPNSA

Q7XLY8 E3 ubiquitin-protein ligase Os04g05909009.5e-1932.42Show/hide
Query:  PPPPP------PVPDYSG--WSPLSISTIVVVCIIFLLLSNYRILKRLCHV---LHGVIFCRPRAHFEENPNDASPQIHG---------------DGLDA
        PPPPP         D SG  +SPL I+ I V+   FLL+S Y  + + C     L G +F              S   HG                GLD 
Subjt:  PPPPP------PVPDYSG--WSPLSISTIVVVCIIFLLLSNYRILKRLCHV---LHGVIFCRPRAHFEENPNDASPQIHG---------------DGLDA

Query:  SMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSP
        ++I  + + ++++    G      T+C+VCLG+F +GE ++ LP C+H+FH  CID+W ++HS+CPLCR+++   +    SP
Subjt:  SMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSP

Q9LF64 RING-H2 finger protein ATL521.9e-1935.67Show/hide
Query:  PPPPPPV-------PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRP--RAHFEENPNDASPQI--HGDGLDASMIRLLPISQFKKNV
        PPPPP            S +SPL I+ I ++    +L+S Y ++ + CH  H           H  E    ++ +I  +GDGL+ SMI+ + + ++K   
Subjt:  PPPPPPV-------PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRP--RAHFEENPNDASPQI--HGDGLDASMIRLLPISQFKKNV

Query:  EAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV
         +G      ++C+VCL +FEE E ++ LP CNH+FH  CID+W ++HS+CPLCR+ V
Subjt:  EAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV

Q9LSW9 RING-H2 finger protein ATL164.2e-1928.84Show/hide
Query:  PPPPPPV-----PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLC------HVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNV
        PPPPPP+        + +  L+++ I ++   FLL+S Y  + + C       +L      R R + ++     SP++   GLD S+IR +PI +FKK  
Subjt:  PPPPPPV-----PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLC------HVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNV

Query:  EAG----------SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILREGDYQT
        +                 + EC+VCL +F++ E ++ +PNC+H FH  CID W +N+++CPLCR+ V   S D + P    +   T     ++  G+ + 
Subjt:  EAG----------SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILREGDYQT

Query:  IRAQILQSSELRRDA
        +  ++  S    RD+
Subjt:  IRAQILQSSELRRDA

Q9SRQ8 RING-H2 finger protein ATL514.7e-1832.4Show/hide
Query:  PPPPPPVPD------YSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEE-------------------NPNDASPQIHGDGLDAS
        PPPP    D       S +SPL I+ I ++   F+L+S Y ++ + CH           A                       NPN       GDGLD S
Subjt:  PPPPPPVPD------YSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEE-------------------NPNDASPQIHGDGLDAS

Query:  MIRLLPISQFKKN---VEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSA
        +I+ + + +++K    VE       +++C+VCL +F+E E ++ LP CNH+FH  CID+W ++HS+CPLCR+ ++  SA
Subjt:  MIRLLPISQFKKN---VEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSA

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein1.2e-2137.22Show/hide
Query:  PPPPPVPDYSGWSP--------------LSISTIVVVCIIFLLLSNYRILKRLCHVLHGV-IFCRPRAHFEENP-NDASPQIHGDGLDASMIRLLPISQF
        PPPPP P  +  SP              L+I+ I ++   FLL+S Y  + + C   H + IF R R   ++NP    SP     GLD S IR +P+ +F
Subjt:  PPPPPVPDYSGWSP--------------LSISTIVVVCIIFLLLSNYRILKRLCHVLHGV-IFCRPRAHFEENP-NDASPQIHGDGLDASMIRLLPISQF

Query:  KK-NVEAG--SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV---LDFSADFTSPNSA
        KK +V AG    +  + EC+VCL +F+E E ++ +PNC H FH  CID W + +++CPLCR+ V     F+ D  S  S+
Subjt:  KK-NVEAG--SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV---LDFSADFTSPNSA

AT3G03550.1 RING/U-box superfamily protein3.3e-1932.4Show/hide
Query:  PPPPPPVPD------YSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEE-------------------NPNDASPQIHGDGLDAS
        PPPP    D       S +SPL I+ I ++   F+L+S Y ++ + CH           A                       NPN       GDGLD S
Subjt:  PPPPPPVPD------YSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEE-------------------NPNDASPQIHGDGLDAS

Query:  MIRLLPISQFKKN---VEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSA
        +I+ + + +++K    VE       +++C+VCL +F+E E ++ LP CNH+FH  CID+W ++HS+CPLCR+ ++  SA
Subjt:  MIRLLPISQFKKN---VEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSA

AT5G05280.1 RING/U-box superfamily protein8.2e-1834.85Show/hide
Query:  SISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH
        S+ T +V+ +  LL +    L  +  VL  V+ C  R    E+P D +  +   G+    ++++P+  +   ++  +     TEC +CLGDF EGE ++ 
Subjt:  SISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH

Query:  LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLD
        LP CNH FH  CID+W  +HSSCP CR  +L+
Subjt:  LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLD

AT5G17600.1 RING/U-box superfamily protein1.4e-2035.67Show/hide
Query:  PPPPPPV-------PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRP--RAHFEENPNDASPQI--HGDGLDASMIRLLPISQFKKNV
        PPPPP            S +SPL I+ I ++    +L+S Y ++ + CH  H           H  E    ++ +I  +GDGL+ SMI+ + + ++K   
Subjt:  PPPPPPV-------PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRP--RAHFEENPNDASPQI--HGDGLDASMIRLLPISQFKKNV

Query:  EAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV
         +G      ++C+VCL +FEE E ++ LP CNH+FH  CID+W ++HS+CPLCR+ V
Subjt:  EAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV

AT5G43420.1 RING/U-box superfamily protein3.0e-2028.84Show/hide
Query:  PPPPPPV-----PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLC------HVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNV
        PPPPPP+        + +  L+++ I ++   FLL+S Y  + + C       +L      R R + ++     SP++   GLD S+IR +PI +FKK  
Subjt:  PPPPPPV-----PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLC------HVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNV

Query:  EAG----------SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILREGDYQT
        +                 + EC+VCL +F++ E ++ +PNC+H FH  CID W +N+++CPLCR+ V   S D + P    +   T     ++  G+ + 
Subjt:  EAG----------SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILREGDYQT

Query:  IRAQILQSSELRRDA
        +  ++  S    RD+
Subjt:  IRAQILQSSELRRDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCGAGTCCGCCGCCGCCACCTCCGGTGCCTGATTACTCTGGCTGGAGTCCGTTGTCAATCTCGACCATCGTCGTCGTCTGCATCATCTTCCTGTTGTTGAGCAA
CTACAGAATATTGAAACGATTGTGCCATGTCCTTCATGGGGTGATTTTCTGCCGACCTCGGGCACACTTTGAAGAAAACCCTAACGATGCTTCTCCGCAAATCCATGGCG
ATGGATTGGATGCCTCGATGATTCGTTTGCTACCGATCTCACAGTTCAAAAAGAACGTAGAAGCCGGATCCCCGGCAAGTATCAATACGGAATGCGCGGTTTGCTTGGGC
GATTTTGAAGAAGGGGAACTGATTAAACATTTACCAAATTGCAATCACTCGTTTCATAGCTCTTGCATCGATTCCTGGTTCCGAAACCACTCGAGTTGCCCTCTCTGCAG
ATCGCATGTCTTGGATTTCTCCGCCGATTTTACCAGTCCCAATTCTGCGTCGGCAATGCTGGAGACGCTGGGAAGGGAAGACATTTTACGAGAAGGGGATTATCAAACTA
TTCGTGCTCAAATTCTGCAAAGCTCGGAATTGAGAAGAGATGCATCGGATCAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCGAGTCCGCCGCCGCCACCTCCGGTGCCTGATTACTCTGGCTGGAGTCCGTTGTCAATCTCGACCATCGTCGTCGTCTGCATCATCTTCCTGTTGTTGAGCAA
CTACAGAATATTGAAACGATTGTGCCATGTCCTTCATGGGGTGATTTTCTGCCGACCTCGGGCACACTTTGAAGAAAACCCTAACGATGCTTCTCCGCAAATCCATGGCG
ATGGATTGGATGCCTCGATGATTCGTTTGCTACCGATCTCACAGTTCAAAAAGAACGTAGAAGCCGGATCCCCGGCAAGTATCAATACGGAATGCGCGGTTTGCTTGGGC
GATTTTGAAGAAGGGGAACTGATTAAACATTTACCAAATTGCAATCACTCGTTTCATAGCTCTTGCATCGATTCCTGGTTCCGAAACCACTCGAGTTGCCCTCTCTGCAG
ATCGCATGTCTTGGATTTCTCCGCCGATTTTACCAGTCCCAATTCTGCGTCGGCAATGCTGGAGACGCTGGGAAGGGAAGACATTTTACGAGAAGGGGATTATCAAACTA
TTCGTGCTCAAATTCTGCAAAGCTCGGAATTGAGAAGAGATGCATCGGATCAA
Protein sequenceShow/hide protein sequence
MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGDGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLG
DFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILREGDYQTIRAQILQSSELRRDASDQ