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MS020717 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020717
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S11, chloroplastic
Genome locationscaffold178:59245..59334
RNA-Seq ExpressionMS020717
SyntenyMS020717
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
A4QKD8 30S ribosomal protein S11, chloroplastic2.9e-0464.71Show/hide
Query:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
        C +KGT+RGTPF AQ    +AIR VV QGMQRA+
Subjt:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
B5LMQ6 30S ribosomal protein S11, chloroplastic2.9e-0464.71Show/hide
Query:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
        C +KGT+RGTPF AQ    +AIR VV QGMQRA+
Subjt:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
P06506 30S ribosomal protein S11, chloroplastic2.2e-0464.71Show/hide
Query:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
        C ++GTKRGTPF AQ    +AIR VV QGMQRA+
Subjt:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
Q09WY4 30S ribosomal protein S11, chloroplastic1.3e-0467.65Show/hide
Query:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
        C +KGTKRGTPF AQ    +AIR VV QGMQRA+
Subjt:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
Q3V501 30S ribosomal protein S11, chloroplastic2.9e-0464.71Show/hide
Query:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
        C +KGT+RGTPF AQ    +AIR VV QGMQRA+
Subjt:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
Arabidopsis top hitse value%identityAlignment
ATCG00750.1 ribosomal protein S114.5e-0561.76Show/hide
Query:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD
        C ++GT+RGTPF AQ    +AIR VV QGMQRA+
Subjt:  CQYKGTKRGTPFTAQ----DAIRIVVYQGMQRAD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCCAGTACAAGGGTACAAAAAGAGGTACACCATTTACCGCTCAAGATGCTATTCGGATAGTAGTGTATCAAGGTATGCAAAGAGCAGAT
mRNA sequenceShow/hide mRNA sequence
TGCCAGTACAAGGGTACAAAAAGAGGTACACCATTTACCGCTCAAGATGCTATTCGGATAGTAGTGTATCAAGGTATGCAAAGAGCAGAT
Protein sequenceShow/hide protein sequence
CQYKGTKRGTPFTAQDAIRIVVYQGMQRAD