| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022142704.1 DNA-directed RNA polymerases II and IV subunit 5A [Momordica charantia] | 9.7e-101 | 92.68 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VL++EEITRLFRIRKTVLQMLKDR YFVGDFEI MSREQF++KYGE+MKRED+VINKA+RNDSSDQIY+FFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCI EISSKFHLEVFQEAEL+VNIKDHVL+PEHQLLT EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 9.0e-107 | 100 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.5e-105 | 97.07 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKRED+VINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 2.3e-102 | 94.63 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 6.5e-105 | 97.56 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CPU1 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.4e-107 | 100 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.1e-105 | 97.07 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKRED+VINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.1e-102 | 94.63 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.1e-105 | 97.56 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFKHKYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.1e-102 | 94.63 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
VL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.6e-56 | 53.4 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++T EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 2.9e-92 | 81.46 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+RI+KT++QML+DR YF+ D E+ M+++QF K+G+NMKRED+V KA+RND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+LT EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 7.5e-56 | 52.91 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+F+ ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++T EE LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.6e-56 | 53.4 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++T EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.8e-56 | 55.56 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMK-----REDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
E E RL+RIRKTVLQM+ DR Y V E+D E FK +YG+ R D+ I A +D +DQ++VFFPE+ K+G+KT+K +M+ +N+ RAI
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMK-----REDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQ +TP A+ I +++ K+ LE F EAEL+VNI +H LVPEH ++T EEK LL RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
+TYR VV
Subjt: VTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 1.7e-31 | 38.42 | Show/hide |
Query: SEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVV
S E + + R+T ++ML+DR Y V D +I++S +QF+ YGE+ + + I+ R DSS +I V F V V M+ + + EN+ ILV+
Subjt: SEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVV
Query: QQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTY
Q ++T A + S F +E+F+ +LLVN+ HVL P+HQ+L ++EK++LL++++++E QLPR+ DP+ RYYGL+ GQV+K+ E + +VTY
Subjt: QQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.1e-93 | 81.46 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+RI+KT++QML+DR YF+ D E+ M+++QF K+G+NMKRED+V KA+RND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+LT EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 5.4e-25 | 33.33 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
E R + R T +ML+DR Y V + E+ ++ +F+ +GE + E + I R+D +I V F + + VK+++ ++ + + ILV+Q
Subjt: EITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
Query: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ + F +E F +LLVNI H+ P+ ++L EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.9e-30 | 38.73 | Show/hide |
Query: LSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
LS EE R + R+ LQML+DR Y V D +I++S F+ YGE + + I+ R+DS+ ++ + F V V +++ + + E + ILV
Subjt: LSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A I S F +E+FQ +LLVNI H L P+HQ+L +EEK TLL++++++E QLPRI D + RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
|
| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 1.8e-44 | 45.63 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENM---KREDIVINKARRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
++EITR+F++R+TVLQML+DR Y + + ++++ RE+F ++ + M +E + ++ + + +D+IYVF+PE KVGV + K +M+ + V R I+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKHKYGENM---KREDIVINKARRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR +SE++ +EVF+EAEL+ NI +H LV ++ +L ++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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