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MS020728 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020728
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNatterin 3-like protein
Genome locationscaffold178:238461..238793
RNA-Seq ExpressionMS020728
SyntenyMS020728
Gene Ontology termsNA
InterPro domainsIPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646726.1 hypothetical protein Csa_004904 [Cucumis sativus]2.3e-1947.66Show/hide
Query:  QSQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWP
        ++ A  +++DWDSI+ILP+YVAFKG N KYL+  S   L FSGS S++  + ++II  + G +RI+ V  G  WIRD   WI  + ID    +P+TLFWP
Subjt:  QSQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWP

Query:  FKVKDNI
         KV +NI
Subjt:  FKVKDNI

XP_022155413.1 uncharacterized protein LOC111022561 [Momordica charantia]2.1e-2556.76Show/hide
Query:  NYKQSQ-AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDT
        NY   + + + IVDWDSIYILP++VAFKG NGKYLKF     L FS SD KDS++A+EI P K GNI IR  E G  WIRD   WI  +  DAN+ +P+T
Subjt:  NYKQSQ-AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDT

Query:  LFWPFKVKDNI
        LFWP KV+D++
Subjt:  LFWPFKVKDNI

XP_022157622.1 uncharacterized protein LOC111024282 [Momordica charantia]3.5e-2052.94Show/hide
Query:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV
        A  +IVDWDSI+ILPK+VAFKG NG+YL FSS   L FS S   DS++  EI P K GNIRI++ E G  W RD   WI     +  + NP+ LFWP K+
Subjt:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV

Query:  KD
         D
Subjt:  KD

XP_022157623.1 uncharacterized protein LOC111024284 [Momordica charantia]2.0e-3160.18Show/hide
Query:  PNYKQ--SQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNP
        P  KQ   QAFY+IVDWDSI+ILPKYV  KGTNG+YL+F+  ++L  +GS++KDS+I YEI+P K GNIR++      LW R RR WI  K IDANT +P
Subjt:  PNYKQ--SQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNP

Query:  DTLFWPFKVKDNI
        + LFWPFKV+DNI
Subjt:  DTLFWPFKVKDNI

XP_022157628.1 uncharacterized protein LOC111024289 [Momordica charantia]8.6e-1952Show/hide
Query:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV
        A  ++VDWDS++ILPK+VAFKG NG+YL FSS   L FS SD KDS++  EI P K GNIRI++ + G  W RD   WI        + NP+ LFWP K+
Subjt:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV

TrEMBL top hitse value%identityAlignment
A0A0A0KD65 Uncharacterized protein2.2e-2049.53Show/hide
Query:  QSQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWP
        ++ A  +++DWDSI+ILP+YVAFKG N KYL+  S   L FSGS S++  + ++II  + G +RI+ V  G  WIRD   WI    ID N  NP+TLFWP
Subjt:  QSQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWP

Query:  FKVKDNI
         KV +NI
Subjt:  FKVKDNI

A0A6J1DMW2 uncharacterized protein LOC1110225611.0e-2556.76Show/hide
Query:  NYKQSQ-AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDT
        NY   + + + IVDWDSIYILP++VAFKG NGKYLKF     L FS SD KDS++A+EI P K GNI IR  E G  WIRD   WI  +  DAN+ +P+T
Subjt:  NYKQSQ-AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDT

Query:  LFWPFKVKDNI
        LFWP KV+D++
Subjt:  LFWPFKVKDNI

A0A6J1DTU6 uncharacterized protein LOC1110242849.5e-3260.18Show/hide
Query:  PNYKQ--SQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNP
        P  KQ   QAFY+IVDWDSI+ILPKYV  KGTNG+YL+F+  ++L  +GS++KDS+I YEI+P K GNIR++      LW R RR WI  K IDANT +P
Subjt:  PNYKQ--SQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNP

Query:  DTLFWPFKVKDNI
        + LFWPFKV+DNI
Subjt:  DTLFWPFKVKDNI

A0A6J1DTV1 uncharacterized protein LOC1110242894.1e-1952Show/hide
Query:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV
        A  ++VDWDS++ILPK+VAFKG NG+YL FSS   L FS SD KDS++  EI P K GNIRI++ + G  W RD   WI        + NP+ LFWP K+
Subjt:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV

A0A6J1DUY9 uncharacterized protein LOC1110242821.7e-2052.94Show/hide
Query:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV
        A  +IVDWDSI+ILPK+VAFKG NG+YL FSS   L FS S   DS++  EI P K GNIRI++ E G  W RD   WI     +  + NP+ LFWP K+
Subjt:  AFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKV

Query:  KD
         D
Subjt:  KD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTAATTATAAGCAATCGCAAGCATTCTACAGCATCGTGGATTGGGACTCCATCTATATACTGCCAAAGTATGTGGCCTTCAAGGGGACCAATGGGAAGTACCTAAAGTT
TAGTTCCGCAGATGTGCTTAGTTTTTCAGGTTCTGATAGTAAGGATTCAACCATTGCTTATGAGATCATCCCTAAAAAATATGGTAATATTCGTATTAGGGATGTTGAAT
ATGGCACCCTTTGGATTCGCGATCGCCGCGGTTGGATCACCGGCAAAAAGATAGATGCTAATACCACCAATCCCGACACCTTGTTTTGGCCCTTCAAAGTTAAAGACAAC
ATA
mRNA sequenceShow/hide mRNA sequence
CCTAATTATAAGCAATCGCAAGCATTCTACAGCATCGTGGATTGGGACTCCATCTATATACTGCCAAAGTATGTGGCCTTCAAGGGGACCAATGGGAAGTACCTAAAGTT
TAGTTCCGCAGATGTGCTTAGTTTTTCAGGTTCTGATAGTAAGGATTCAACCATTGCTTATGAGATCATCCCTAAAAAATATGGTAATATTCGTATTAGGGATGTTGAAT
ATGGCACCCTTTGGATTCGCGATCGCCGCGGTTGGATCACCGGCAAAAAGATAGATGCTAATACCACCAATCCCGACACCTTGTTTTGGCCCTTCAAAGTTAAAGACAAC
ATA
Protein sequenceShow/hide protein sequence
PNYKQSQAFYSIVDWDSIYILPKYVAFKGTNGKYLKFSSADVLSFSGSDSKDSTIAYEIIPKKYGNIRIRDVEYGTLWIRDRRGWITGKKIDANTTNPDTLFWPFKVKDN
I