CuGenDBv2

Gene ID	MS020729
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Fanconi anemia group D2 protein
Genome location	scaffold178:254962..255261
RNA-Seq Expression	MS020729
Synteny	MS020729
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN44712.1 hypothetical protein Csa_016169 [Cucumis sativus]

1.8e-22

86.96

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFS+GF   AASIS FVW+DLLAYR ALSSDASFMER+FDALEARISNLES RNRNSVSSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

XP_008447214.1 PREDICTED: uncharacterized protein LOC103489712 isoform X2 [Cucumis melo]

2.8e-20

84.06

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFS+GF   AASISQFVW+DLLA+RSAL SD   MERNFDALEARISNLESVRNRNS+SSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

XP_008447216.1 PREDICTED: uncharacterized protein LOC103489712 isoform X3 [Cucumis melo]

2.8e-20

84.06

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFS+GF   AASISQFVW+DLLA+RSAL SD   MERNFDALEARISNLESVRNRNS+SSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

XP_022143614.1 uncharacterized protein LOC111013471 isoform X1 [Momordica charantia]

9.4e-24

95.65

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSD   MERNFDALEARISNLESVRNRNSVSSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

XP_022143615.1 uncharacterized protein LOC111013471 isoform X2 [Momordica charantia]

9.4e-24

95.65

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSD   MERNFDALEARISNLESVRNRNSVSSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8L3 Uncharacterized protein

8.6e-23

86.96

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFS+GF   AASIS FVW+DLLAYR ALSSDASFMER+FDALEARISNLES RNRNSVSSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

A0A1S3BGW3 uncharacterized protein LOC103489712 isoform X1

1.4e-20

84.06

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFS+GF   AASISQFVW+DLLA+RSAL SD   MERNFDALEARISNLESVRNRNS+SSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

A0A1S3BHI8 uncharacterized protein LOC103489712 isoform X3

1.4e-20

84.06

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFS+GF   AASISQFVW+DLLA+RSAL SD   MERNFDALEARISNLESVRNRNS+SSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

A0A6J1CP96 uncharacterized protein LOC111013471 isoform X2

4.5e-24

95.65

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSD   MERNFDALEARISNLESVRNRNSVSSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

A0A6J1CPU7 uncharacterized protein LOC111013471 isoform X1

4.5e-24

95.65

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE
        MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSD   MERNFDALEARISNLESVRNRNSVSSAE
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G07568.1 unknown protein

3.7e-10

55.17

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Query:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLES
        MLRTRL WF++GF     SI+  VW+DL A R A+SSD   M+  F ALE R+S LES
Subjt:  MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLES

Sequences

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CDS sequence

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ATGTTGAGAACTCGATTGTTTTGGTTCAGCGTTGGATTTGGAGCCGCGGCCGCTTCCATTTCGCAATTCGTTTGGAAAGATCTATTGGCCTATCGATCTGCTCTTTCCTC
TGATGCAAGTTTTATGGAGCGGAATTTTGACGCCCTGGAAGCTAGAATCTCGAATCTGGAGTCAGTTCGGAACCGGAATTCGGTTTCATCTGCTGAG

mRNA sequence

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Protein sequence

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MLRTRLFWFSVGFGAAAASISQFVWKDLLAYRSALSSDASFMERNFDALEARISNLESVRNRNSVSSAE

MS020729 (gene) of Bitter gourd (TR) v1 genome