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MS020740 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020740
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold178:403020..403187
RNA-Seq ExpressionMS020740
SyntenyMS020740
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0006810 - transport (biological process)
GO:0006950 - response to stress (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW33721.1 putative ribonuclease H protein [Vitis vinifera]1.4e-0648.21Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        KGGR+TL +  L S+P+YF SL++ P+ V KR+EK   DF   GG     +HL+KW
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

RVW45478.1 MAP3K epsilon protein kinase 1 [Vitis vinifera]6.5e-0748.21Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        KGGR+TL +  L S+P+YF S+++ P+ VIKR+EK   DF   GG     +HL+KW
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

RVX06635.1 putative ribonuclease H protein [Vitis vinifera]1.4e-0648.21Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        KGGR+TL +  L S+P+YF SL++ P+ V KR+EK   DF   GG     +HL+KW
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

RVX11981.1 putative ribonuclease H protein [Vitis vinifera]1.4e-0648.21Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        KGGR+TL +  L S+P+YF SL++ P+ V KR+EK   DF   GG     +HL+KW
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

XP_030509342.1 uncharacterized protein LOC115724026 [Cannabis sativa]4.5e-0858.18Show/hide
Query:  GGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        GGRLTL Q VL+SLPLYF S  K P+ V K +EK + DFF  G E  C  HLV W
Subjt:  GGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

TrEMBL top hitse value%identityAlignment
A0A803P465 Uncharacterized protein6.3e-0858.93Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        KGGRLTL Q VL+SLPLYF SL KAP  V K +EK + DF   G E     HLV W
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

A0A803PW65 Uncharacterized protein3.7e-0855.36Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        +GGRLTL Q VL+SLP+Y+ SL KAP+ V+K +EK + DFF  GG+     HLV W
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

A0A803PZS1 Uncharacterized protein2.8e-0857.14Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        +GGRLTL Q VL+SLP+Y+ SL KAP+ VIK +EK + DFF  GG+     HLV W
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

A0A803QEA6 Uncharacterized protein6.3e-0853.57Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        +GGRLTL Q VL+SLP+Y+ SL KAP+ V+K +EK + +FF  GG+     HLV W
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

A0A803QQM3 Uncharacterized protein9.7e-0957.14Show/hide
Query:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW
        +GGRLTL Q VL+SLP+YF SL KAP+ V+K +EK + DFF  GG+     HLV W
Subjt:  KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGGAGGTCGCCTGACTTTGGCACAATTAGTTCTCACTAGCTTGCCCCTATACTTTTTCTCTTTATTAAAGGCCCCGGAGGAGGTTATCAAACGGATGGAGAAAGCAGT
GTGGGATTTTTTCTGTAATGGTGGTGAATATCACTGTTGCAGCCACCTAGTTAAATGG
mRNA sequenceShow/hide mRNA sequence
AAGGGAGGTCGCCTGACTTTGGCACAATTAGTTCTCACTAGCTTGCCCCTATACTTTTTCTCTTTATTAAAGGCCCCGGAGGAGGTTATCAAACGGATGGAGAAAGCAGT
GTGGGATTTTTTCTGTAATGGTGGTGAATATCACTGTTGCAGCCACCTAGTTAAATGG
Protein sequenceShow/hide protein sequence
KGGRLTLAQLVLTSLPLYFFSLLKAPEEVIKRMEKAVWDFFCNGGEYHCCSHLVKW