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MS020756 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020756
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold487:223279..223656
RNA-Seq ExpressionMS020756
SyntenyMS020756
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599936.1 hypothetical protein SDJN03_05169, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3676.27Show/hide
Query:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD
        P  HRPSAV   KFRP S ISP W RR+  A RCVS GGWGS  AELERE++ EGEEWLKLGRL+EKCG GGKG+VELLE LE EAIM EDEGRDP DY 
Subjt:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD

Query:  RRAKIFSTSSKVFQALKQ
        RRAKIFSTSS+VFQALKQ
Subjt:  RRAKIFSTSSKVFQALKQ

KAG7030615.1 hypothetical protein SDJN02_04652, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3675.42Show/hide
Query:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD
        P  HRPSAV   KFRP S +SP W RR+  A RCVS GGWGS   ELERE++ EGEEWLKLGRL+EKCG GGKG+VELLE LE EAIMGEDEGRDP DY 
Subjt:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD

Query:  RRAKIFSTSSKVFQALKQ
        RRAKIFSTSS+VFQALKQ
Subjt:  RRAKIFSTSSKVFQALKQ

XP_022146811.1 uncharacterized protein LOC111015926 [Momordica charantia]1.7e-63100Show/hide
Query:  MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDE
        MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDE
Subjt:  MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDE

Query:  GRDPIDYDRRAKIFSTSSKVFQALKQ
        GRDPIDYDRRAKIFSTSSKVFQALKQ
Subjt:  GRDPIDYDRRAKIFSTSSKVFQALKQ

XP_022941969.1 uncharacterized protein LOC111447176 [Cucurbita moschata]7.2e-3877.12Show/hide
Query:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD
        P  HRPSAV   KFRP S +SP W RR+  A RCVSQGGWGS  AELERE++ EGEEWLKLGRL+EKCG GGKG+VELLE LE EAIMGEDEGRDP DY 
Subjt:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD

Query:  RRAKIFSTSSKVFQALKQ
        RRAKIFSTSS+VFQALKQ
Subjt:  RRAKIFSTSSKVFQALKQ

XP_023541783.1 uncharacterized protein LOC111801831 [Cucurbita pepo subsp. pepo]2.1e-3776.27Show/hide
Query:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD
        P  HRPSAV   KFRP S +SP W RR+G A RCVSQGGWGS  AELERE + EGEEWLKLGRL+EKCG GGKG+VELLE LE EAIMGEDEGRDP +Y 
Subjt:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD

Query:  RRAKIFSTSSKVFQALKQ
        RRAKIFSTSS+VFQALK+
Subjt:  RRAKIFSTSSKVFQALKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KQQ4 Uncharacterized protein3.7e-3264.57Show/hide
Query:  LRPPPPPSSHRPSAVKF---RPTSAISPAW-----RRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKC-GGGKGVVELLECLEMEAIMGED
        + PPPPP  HRPS   F   RPT ++S  W        G   RCVSQGGWGS   +      + EEWLKLGRL+EKC GGGKG+VELLECLE EAIMGED
Subjt:  LRPPPPPSSHRPSAVKF---RPTSAISPAW-----RRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKC-GGGKGVVELLECLEMEAIMGED

Query:  EGRDPIDYDRRAKIFSTSSKVFQALKQ
        EGRDP DY+RRAKIFSTSS+VFQALKQ
Subjt:  EGRDPIDYDRRAKIFSTSSKVFQALKQ

A0A6J1D0H7 uncharacterized protein LOC1110159268.2e-64100Show/hide
Query:  MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDE
        MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDE
Subjt:  MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDE

Query:  GRDPIDYDRRAKIFSTSSKVFQALKQ
        GRDPIDYDRRAKIFSTSSKVFQALKQ
Subjt:  GRDPIDYDRRAKIFSTSSKVFQALKQ

A0A6J1FPZ7 uncharacterized protein LOC1114471763.5e-3877.12Show/hide
Query:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD
        P  HRPSAV   KFRP S +SP W RR+  A RCVSQGGWGS  AELERE++ EGEEWLKLGRL+EKCG GGKG+VELLE LE EAIMGEDEGRDP DY 
Subjt:  PSSHRPSAV---KFRPTSAISPAW-RRRGTASRCVSQGGWGSG-AELEREVAAEGEEWLKLGRLKEKCG-GGKGVVELLECLEMEAIMGEDEGRDPIDYD

Query:  RRAKIFSTSSKVFQALKQ
        RRAKIFSTSS+VFQALKQ
Subjt:  RRAKIFSTSSKVFQALKQ

A0A6J1FW01 uncharacterized protein LOC1114478174.0e-3467.91Show/hide
Query:  MEVSSVFQLRPPP-PPSSHRPSAV---KFRPTSAISPAW---RRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKC-GGGKGVVELLECLEM
        M+V S   + PPP PP  HR S V   K RP SAISP+W   R    A RCVSQGGWG G+  E E+    EEWLKLGRL+EKC GGGKGVVELLECLE 
Subjt:  MEVSSVFQLRPPP-PPSSHRPSAV---KFRPTSAISPAW---RRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKC-GGGKGVVELLECLEM

Query:  EAIMGEDEGRDPIDYDRRAKIFSTSSKVFQALKQ
        EAIMGEDEGR+P DY+RRAKIFSTSS+VFQALKQ
Subjt:  EAIMGEDEGRDPIDYDRRAKIFSTSSKVFQALKQ

A0A6J1JM89 uncharacterized protein LOC1114859331.5e-3367.91Show/hide
Query:  MEVSSVFQLRPPPPPS-SHRPSAV---KFRPTSAISPAW---RRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKC-GGGKGVVELLECLEM
        M+V S   + PPP PS  HR S V   K RP SAISP W   R    A RCVSQGGWG G+  E+E+    EEWLKLGRL EKC GGGKGVVELLECLE 
Subjt:  MEVSSVFQLRPPPPPS-SHRPSAV---KFRPTSAISPAW---RRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKC-GGGKGVVELLECLEM

Query:  EAIMGEDEGRDPIDYDRRAKIFSTSSKVFQALKQ
        EAIMGEDEGR+P DY+RRAKIFSTSS+VFQALKQ
Subjt:  EAIMGEDEGRDPIDYDRRAKIFSTSSKVFQALKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein4.5e-1452.27Show/hide
Query:  ASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGG--GKGVVELLECLEMEAIMGEDEGRDPIDYDRRAKIFSTSSKVFQALKQ
        A+RCV+ G     A +E     E EE   L + +  CGG   +GV ELLECLE EAIMG D+GRDP DY+RRAKIF  SSK+F+ L +
Subjt:  ASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGG--GKGVVELLECLEMEAIMGEDEGRDPIDYDRRAKIFSTSSKVFQALKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCTCTTCTGTATTTCAATTAAGACCACCACCACCACCCTCTTCCCACCGCCCCTCCGCCGTCAAATTCAGGCCAACTTCAGCCATCTCCCCTGCGTGGCGCCG
TCGGGGTACAGCGTCGAGATGTGTTAGCCAGGGTGGATGGGGTTCTGGGGCGGAGCTAGAGAGAGAAGTGGCTGCGGAGGGAGAGGAGTGGCTGAAGCTGGGGAGGCTGA
AGGAGAAGTGCGGCGGCGGAAAGGGAGTGGTGGAGCTGCTTGAATGTTTGGAAATGGAAGCCATTATGGGGGAAGATGAGGGCAGAGATCCCATAGATTATGATCGGAGG
GCCAAGATTTTCAGTACCAGTTCTAAAGTTTTTCAAGCTCTAAAGCAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCTCTTCTGTATTTCAATTAAGACCACCACCACCACCCTCTTCCCACCGCCCCTCCGCCGTCAAATTCAGGCCAACTTCAGCCATCTCCCCTGCGTGGCGCCG
TCGGGGTACAGCGTCGAGATGTGTTAGCCAGGGTGGATGGGGTTCTGGGGCGGAGCTAGAGAGAGAAGTGGCTGCGGAGGGAGAGGAGTGGCTGAAGCTGGGGAGGCTGA
AGGAGAAGTGCGGCGGCGGAAAGGGAGTGGTGGAGCTGCTTGAATGTTTGGAAATGGAAGCCATTATGGGGGAAGATGAGGGCAGAGATCCCATAGATTATGATCGGAGG
GCCAAGATTTTCAGTACCAGTTCTAAAGTTTTTCAAGCTCTAAAGCAA
Protein sequenceShow/hide protein sequence
MEVSSVFQLRPPPPPSSHRPSAVKFRPTSAISPAWRRRGTASRCVSQGGWGSGAELEREVAAEGEEWLKLGRLKEKCGGGKGVVELLECLEMEAIMGEDEGRDPIDYDRR
AKIFSTSSKVFQALKQ