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MS020780 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020780
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGATA-N domain-containing protein
Genome locationscaffold487:446602..448237
RNA-Seq ExpressionMS020780
SyntenyMS020780
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0071805 - potassium ion transmembrane transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0015079 - potassium ion transmembrane transporter activity (molecular function)
InterPro domainsIPR008013 - GATA-type transcription activator, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456929.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo]5.8e-6782.86Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSHGGFP    QGW + R     R SN RV A+    GEERE  GG E KKSLFSSVTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSSSGNFFSK FSK
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
XP_022146826.1 uncharacterized protein LOC111015936 [Momordica charantia]7.8e-8899.41Show/hide
Query:  AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIG
        AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIG
Subjt:  AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIG

Query:  GTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        GTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLG YVHVACLENSNSSSGNFFSKFFSK
Subjt:  GTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
XP_022941869.1 uncharacterized protein LOC111447101 [Cucurbita moschata]2.6e-6780Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSH GF     QGW  +R     R SN RVSAK+   GEE+EDGG ++ K+SLFSSVTEALDFSQVRSSRDAELL+DARQAT++GGRM+REQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLE SNSSS NFF+KFF K
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
XP_023532465.1 uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]5.8e-6780Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSH GF     QGW  +R     R SN RVSAKA   GEE+ED G ++ K+SLFSSVTEALDFSQVRSSRDAELL+DARQAT++GGRM+REQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLE SNSSS NFF+KFF K
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
XP_038891315.1 uncharacterized protein LOC120080762 [Benincasa hispida]4.3e-7084.57Show/hide
Query:  VAISPSHGGFPP---QGWNA--SRLGRRSNYRVSAKAAASGEERED-GGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSHGGFP    QGW     R  R SN RV AKAA  GEERE  GGG E KKSLFSSVTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGAL
Subjt:  VAISPSHGGFPP---QGWNA--SRLGRRSNYRVSAKAAASGEERED-GGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE S SSSGNFFSK FSK
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
TrEMBL top hitse value%identityAlignment
A0A0A0KM41 GATA-N domain-containing protein4.8e-6781.71Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAI PSHGGFP    QGW + R     R SN RV A+    GEERE GGG E KKSLFSSVTEALDFS VRS+RDAELL+DARQAT++GGRM+REQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSS GNFFSKFFSK
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
A0A1S3C3X8 uncharacterized protein LOC1034967312.8e-6782.86Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSHGGFP    QGW + R     R SN RV A+    GEERE  GG E KKSLFSSVTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSSSGNFFSK FSK
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
A0A5D3DFR3 GATA-N domain-containing protein2.8e-6782.86Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSHGGFP    QGW + R     R SN RV A+    GEERE  GG E KKSLFSSVTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSSSGNFFSK FSK
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
A0A6J1D0J3 uncharacterized protein LOC1110159363.8e-8899.41Show/hide
Query:  AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIG
        AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIG
Subjt:  AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIG

Query:  GTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        GTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLG YVHVACLENSNSSSGNFFSKFFSK
Subjt:  GTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
A0A6J1FPP4 uncharacterized protein LOC1114471011.3e-6780Show/hide
Query:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL
        VAISPSH GF     QGW  +R     R SN RVSAK+   GEE+EDGG ++ K+SLFSSVTEALDFSQVRSSRDAELL+DARQAT++GGRM+REQYGAL
Subjt:  VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGAL

Query:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLE SNSSS NFF+KFF K
Subjt:  RRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56290.1 unknown protein2.8e-5171.53Show/hide
Query:  AASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKD
        +A  E+ ED    E + SLF+ +T+ALDFSQVRS +DAELL +AR+AT+SG +MT+EQYGALRRKIGGTYKDFFKSY+EVDGQYVEEGWVDKTCK+CKKD
Subjt:  AASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKD

Query:  TRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK
        T+GEARQVDKLGRY HV+CL+  N  SGNFF++ FS+
Subjt:  TRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGG
CGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTAT
TGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTAC
ATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATA
TGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA
mRNA sequenceShow/hide mRNA sequence
GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGG
CGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTAT
TGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTAC
ATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATA
TGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA
Protein sequenceShow/hide protein sequence
AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSY
IEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK