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MS020795 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020795
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold487:592431..593651
RNA-Seq ExpressionMS020795
SyntenyMS020795
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600897.1 hypothetical protein SDJN03_06130, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6080.25Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ
        M KSLPSAT LQQF  + V SKKPQSAA K K+RIRVSP ETP  D+VRVISEP K + M EKNR+PLADVVSDCVKRWFQDTLKEA+AGD +MQVLVGQ
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ

Query:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        MFCSGYGVPKDT+KGLAWINRASK QAS+G+VSDRHPGY+ATDSE S+RRVK+DDIR
Subjt:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

XP_022941871.1 uncharacterized protein LOC111447103 [Cucurbita moschata]8.0e-6382.91Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        M KS P A+RLQQF  +VVSSKKPQS  A+ K +IRVSPPETP SDSVRVISEPA+P+K M  KNRIPLADVVSDC KRWFQDTLKEANAGDT+MQVLVG
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        QMFCSGYGVPKDTRKGLAWINRASK QAS+ K SDRHP Y+ATDSESSDRRVKRDDIR
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

XP_022957582.1 uncharacterized protein LOC111458931 [Cucurbita moschata]6.3e-6079.62Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ
        M KSLPSAT LQQF  + V SKKPQSAA K K+RIRVSP ETP  D+VRVISEP K + M EKNR+PLADVVSDCVKRWFQDTLKEA+AGD +MQVLVGQ
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ

Query:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        MFCSGYGVPKDT+KGLAWINRASK QA +G+VSDRHPGY+ATDSE S+RRVK+DDIR
Subjt:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

XP_022996650.1 uncharacterized protein LOC111491826 [Cucurbita maxima]4.8e-6082.35Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        M KSLP A+RLQQF  +VVSSKKPQS   + K +IRVSPPETP SDSVRVISEPA+P+K M  KNRIPLADVVSDC KRWFQDTLKEANAGDT+MQVLVG
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVK
        QMFCSGYGVPKDTRKGLAWI+RASK QAS+ K SDRHPGY+ATDSESSDRRVK
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVK

XP_023552657.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo]2.7e-6383.54Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        M KSLP A+RLQQF  +VVSSKKPQS  A+ K +IRVSPPETP SDSVRVISEPA+P+K M  KNRIPLADVVSDC KRWFQDTLKEANAGDT+MQVLVG
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        QMFCSGYGVPKDTRKGLAWINRASK QAS+ K SDRHP Y+ATDSESSDRRVKRDDIR
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

TrEMBL top hitse value%identityAlignment
A0A0A0KM25 Uncharacterized protein9.2e-5777.85Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQSAAKSKARIRVSPPETPASDSVRVISEPAKPQKM--AEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        M KSLPS  R QQF  LV SSK PQS  K K+RIR SP ETP S SVRVISEP K + M   EKNR PLADVVSDCVKRWFQDTLKEA AGDTSMQVLVG
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQSAAKSKARIRVSPPETPASDSVRVISEPAKPQKM--AEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        QMFCSGYGVPK+T+KGLAWI RASK QAS+ K SDRHPGY+ATDSESSDRRVKRD++R
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

A0A6J1FNN7 uncharacterized protein LOC1114471033.9e-6382.91Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        M KS P A+RLQQF  +VVSSKKPQS  A+ K +IRVSPPETP SDSVRVISEPA+P+K M  KNRIPLADVVSDC KRWFQDTLKEANAGDT+MQVLVG
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        QMFCSGYGVPKDTRKGLAWINRASK QAS+ K SDRHP Y+ATDSESSDRRVKRDDIR
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

A0A6J1GZI5 uncharacterized protein LOC1114589313.1e-6079.62Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ
        M KSLPSAT LQQF  + V SKKPQSAA K K+RIRVSP ETP  D+VRVISEP K + M EKNR+PLADVVSDCVKRWFQDTLKEA+AGD +MQVLVGQ
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ

Query:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        MFCSGYGVPKDT+KGLAWINRASK QA +G+VSDRHPGY+ATDSE S+RRVK+DDIR
Subjt:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

A0A6J1JUC7 uncharacterized protein LOC1114884392.6e-5978.34Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ
        M KSLPSA+ LQQF  + V SKKPQSAA K K+RIRVSP ETP  D+VRVISEP K + M E+NR+PLADVVSDCVKRWFQDTLKEA+AGD +MQVLVGQ
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQSAA-KSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQ

Query:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR
        MFCSGYGVPKDT+KGLAWINRASK QA +G+VSDRHPGY+ATDSE S+RRVK+DDIR
Subjt:  MFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR

A0A6J1K2L5 uncharacterized protein LOC1114918262.3e-6082.35Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        M KSLP A+RLQQF  +VVSSKKPQS   + K +IRVSPPETP SDSVRVISEPA+P+K M  KNRIPLADVVSDC KRWFQDTLKEANAGDT+MQVLVG
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQS-AAKSKARIRVSPPETPASDSVRVISEPAKPQK-MAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVK
        QMFCSGYGVPKDTRKGLAWI+RASK QAS+ K SDRHPGY+ATDSESSDRRVK
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)3.7e-2644.9Show/hide
Query:  MGKSLPSATRLQQFTNLVVSSKKPQSAAKSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNR--IPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG
        MGKS+P  T L+             ++A     I+ S P  P S       + +     +E  R  +PL+ VVSDC KRWF+DTL+EA AG+ +MQVL+G
Subjt:  MGKSLPSATRLQQFTNLVVSSKKPQSAAKSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNR--IPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVG

Query:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSES
        QM+ SGYGVPKD RKG  WI +AS+ ++S+ KV D+ PGY A+DS+S
Subjt:  QMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSES

AT5G05360.1 unknown protein5.9e-3261.62Show/hide
Query:  SEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRR
        S PA        NR+PLA VV DCV+RWFQDTLKEA +GD  MQVLVGQM+CSGYG+PKD  KG AWIN+AS++++S  +VSD+ PGY A+DS+S+D++
Subjt:  SEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRR

AT5G05360.2 unknown protein6.8e-2863.22Show/hide
Query:  SEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPG
        S PA        NR+PLA VV DCV+RWFQDTLKEA +GD  MQVLVGQM+CSGYG+PKD  KG AWIN+AS++++S  +VSD+ PG
Subjt:  SEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQMFCSGYGVPKDTRKGLAWINRASKSQASIGKVSDRHPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATCGCTTCCATCGGCGACTCGCCTCCAACAATTCACCAATCTCGTCGTCTCCTCCAAAAAGCCCCAATCGGCGGCCAAGTCCAAGGCTCGGATCCGGGTTTC
GCCGCCCGAAACTCCGGCCTCCGATAGCGTCCGAGTCATCTCGGAGCCGGCGAAGCCGCAGAAGATGGCGGAGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACT
GCGTGAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAACGCCGGCGACACGTCGATGCAGGTCTTGGTAGGCCAGATGTTCTGCTCCGGCTATGGAGTTCCTAAGGAC
ACTCGGAAGGGGCTTGCTTGGATCAATCGAGCTTCGAAAAGTCAGGCATCCATAGGGAAAGTAAGCGATAGACATCCAGGTTACGTTGCAACTGATTCCGAATCAAGCGA
TAGGAGAGTGAAACGAGACGACATCAGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAATCGCTTCCATCGGCGACTCGCCTCCAACAATTCACCAATCTCGTCGTCTCCTCCAAAAAGCCCCAATCGGCGGCCAAGTCCAAGGCTCGGATCCGGGTTTC
GCCGCCCGAAACTCCGGCCTCCGATAGCGTCCGAGTCATCTCGGAGCCGGCGAAGCCGCAGAAGATGGCGGAGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACT
GCGTGAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAACGCCGGCGACACGTCGATGCAGGTCTTGGTAGGCCAGATGTTCTGCTCCGGCTATGGAGTTCCTAAGGAC
ACTCGGAAGGGGCTTGCTTGGATCAATCGAGCTTCGAAAAGTCAGGCATCCATAGGGAAAGTAAGCGATAGACATCCAGGTTACGTTGCAACTGATTCCGAATCAAGCGA
TAGGAGAGTGAAACGAGACGACATCAGA
Protein sequenceShow/hide protein sequence
MGKSLPSATRLQQFTNLVVSSKKPQSAAKSKARIRVSPPETPASDSVRVISEPAKPQKMAEKNRIPLADVVSDCVKRWFQDTLKEANAGDTSMQVLVGQMFCSGYGVPKD
TRKGLAWINRASKSQASIGKVSDRHPGYVATDSESSDRRVKRDDIR