; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020825 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020825
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold1172:35819..36481
RNA-Seq ExpressionMS020825
SyntenyMS020825
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590295.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.2e-11890.5Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCE+KMFHGAYALIRRMIRKGV PDKKTYGILV GWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKM KEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI+VICNSGEVDFCINIYHEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LL+  +EDGH PFPSLYGPIIKGMC+RGQFDDAFCFF+DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        +KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

KAG7023899.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-11890.5Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCE+KMFHGAYALIRRMIRKGV PDKKTYGILV GWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKM KEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI+VICNSGEVDFCINIYHEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LL+  +EDGH PFPSLYGPIIKGMC+RGQFDDAFCFF+DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        +KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

XP_004142520.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sativus]1.7e-11991.4Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCEVKMFHGAYALIRRMIRKGV PDKKTYG LV GWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAK+MVRKMTKEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI VICNSGEVDFCINI+HEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LLHC +EDGH PFPSLYGPI+KGMC+RGQFDDAFCFF DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
         KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

XP_022151697.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Momordica charantia]2.0e-128100Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        VKGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

XP_038879743.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa hispida]1.1e-11890.95Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCEVKMFHGAYALIRRMIRKGV PDKKTYG LV GWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGY ESAK+MVRKMTKEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI VICNSGEVDFCINI+HEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LLHC +EDGH PFPSLYGPI+KGMC+R QFDDAFCFF+DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
         KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

TrEMBL top hitse value%identityAlignment
A0A0A0M105 Uncharacterized protein8.3e-12091.4Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCEVKMFHGAYALIRRMIRKGV PDKKTYG LV GWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAK+MVRKMTKEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI VICNSGEVDFCINI+HEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LLHC +EDGH PFPSLYGPI+KGMC+RGQFDDAFCFF DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
         KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

A0A1S3CJ74 pentatricopeptide repeat-containing protein At5g18390, mitochondrial2.7e-11890.5Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCEVKMFHGAYALIRRMI+KGV PDKKTYG LV GWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAK+MVRKMTKEG V
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI VICNSGEVDFCINI+HEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LL+C +EDGH PFPSLYGPIIKGMC+RGQFDDAFCFF DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
         KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

A0A5A7V4T7 Pentatricopeptide repeat-containing protein2.7e-11890.5Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCEVKMFHGAYALIRRMI+KGV PDKKTYG LV GWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAK+MVRKMTKEG V
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI VICNSGEVDFCINI+HEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LL+C +EDGH PFPSLYGPIIKGMC+RGQFDDAFCFF DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
         KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

A0A6J1DE73 pentatricopeptide repeat-containing protein At5g18390, mitochondrial9.8e-129100Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        VKGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

A0A6J1H8G8 pentatricopeptide repeat-containing protein At5g18390, mitochondrial2.0e-11890.5Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNALL ALCE+KMFHGAYALIRRMIRKGV PDKKTYGILV GWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKM KEGSV
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFNSLI+VICNSGEVDFCINIYHEVCKLGLCPDINTYKIL+PATSKVGRIDEAF+LL+  +EDGH PFPSLYGPIIKGMC+RGQFDDAFCFF+DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        +KGHPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

SwissProt top hitse value%identityAlignment
Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial1.3e-2931.02Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YN+L+   C+    H A  +   M+ KG  PD  TY IL+N +C A ++ +      E+S KG  P     + LV G   +G L +AK + ++M   G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVED-GHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM
        P V T+  L+  +C++GE++  + I+ ++ K  +   I  Y I++       ++D+A+ L  CS+ D G KP    Y  +I G+C++G   +A   F  M
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVED-GHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM

Query:  KVKGHPPNRPVYTMLI
        K  G  P+   Y +LI
Subjt:  KVKGHPPNRPVYTMLI

Q94JX6 Pentatricopeptide repeat-containing protein At5g18390, mitochondrial9.5e-10578.73Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YN+LL ALC+VKMFHGAYALIRRMIRKG+ PDK+TY ILVNGWCSAGKM+EAQEFL+EMS++GFNPP RGRDLL+EGLLNAGYLESAK MV KMTK G V
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFN LI  I  SGEV+FCI +Y+  CKLGLC DI+TYK L+PA SK+G+IDEAF+LL+  VEDGHKPFPSLY PIIKGMCR G FDDAF FF+DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        VK HPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

Q9FIX3 Pentatricopeptide repeat-containing protein At5g397101.8e-3132.56Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YN L+   C+   FH A  +   M+R G+ P   TY  L++  C AG M  A EFL++M  +G  P  R    LV+G    GY+  A  ++R+M   G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        P V T+N+LI+  C +G+++  I +  ++ + GL PD+ +Y  ++    +   +DEA ++    VE G KP    Y  +I+G C + +  +A   + +M 
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLI
          G PP+   YT LI
Subjt:  VKGHPPNRPVYTMLI

Q9FJE6 Putative pentatricopeptide repeat-containing protein At5g599005.0e-2932.56Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YNAL+ +LC+ + FH A  L  RM + G+ P+  TY IL++ +C  GK+  A  FL EM   G    +   + L+ G    G + +A+  + +M  +   
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        P V T+ SL+   C+ G+++  + +YHE+   G+ P I T+  L+    + G I +A KL +   E   KP    Y  +I+G C  G    AF F  +M 
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLI
         KG  P+   Y  LI
Subjt:  VKGHPPNRPVYTMLI

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic2.2e-2931.02Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        Y++L++  C       A  +   MI K   P+  TY  L+ G+C A ++ E  E   EMSQ+G        + L++GL  AG  + A+ + +KM  +G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVE-DGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM
        PD+ T++ L+  +C  G+++  + ++  + K  + PDI TY I++    K G++++ + L  CS+   G KP   +Y  +I G CR+G  ++A   F +M
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVE-DGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM

Query:  KVKGHPPNRPVYTMLI
        K  G  PN   Y  LI
Subjt:  KVKGHPPNRPVYTMLI

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.5e-3031.16Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        Y A++S  C++     A  L   M  KG+ PD  T+  L+NG+C AG M++A      M Q G +P +     L++GL   G L+SA  ++ +M K G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        P++ T+NS+++ +C SG ++  + +  E    GL  D  TY  L+ A  K G +D+A ++L   +  G +P    +  ++ G C  G  +D     N M 
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLI
         KG  PN   +  L+
Subjt:  VKGHPPNRPVYTMLI

AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-3031.02Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        Y++L++  C       A  +   MI K   P+  TY  L+ G+C A ++ E  E   EMSQ+G        + L++GL  AG  + A+ + +KM  +G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVE-DGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM
        PD+ T++ L+  +C  G+++  + ++  + K  + PDI TY I++    K G++++ + L  CS+   G KP   +Y  +I G CR+G  ++A   F +M
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVE-DGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM

Query:  KVKGHPPNRPVYTMLI
        K  G  PN   Y  LI
Subjt:  KVKGHPPNRPVYTMLI

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein9.3e-3131.02Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YN+L+   C+    H A  +   M+ KG  PD  TY IL+N +C A ++ +      E+S KG  P     + LV G   +G L +AK + ++M   G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVED-GHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM
        P V T+  L+  +C++GE++  + I+ ++ K  +   I  Y I++       ++D+A+ L  CS+ D G KP    Y  +I G+C++G   +A   F  M
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVED-GHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDM

Query:  KVKGHPPNRPVYTMLI
        K  G  P+   Y +LI
Subjt:  KVKGHPPNRPVYTMLI

AT5G18390.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-10678.73Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YN+LL ALC+VKMFHGAYALIRRMIRKG+ PDK+TY ILVNGWCSAGKM+EAQEFL+EMS++GFNPP RGRDLL+EGLLNAGYLESAK MV KMTK G V
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        PD+ TFN LI  I  SGEV+FCI +Y+  CKLGLC DI+TYK L+PA SK+G+IDEAF+LL+  VEDGHKPFPSLY PIIKGMCR G FDDAF FF+DMK
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLITMCGRG
        VK HPPNRPVYTMLITMCGRG
Subjt:  VKGHPPNRPVYTMLITMCGRG

AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-3232.56Show/hide
Query:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV
        YN L+   C+   FH A  +   M+R G+ P   TY  L++  C AG M  A EFL++M  +G  P  R    LV+G    GY+  A  ++R+M   G  
Subjt:  YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSV

Query:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK
        P V T+N+LI+  C +G+++  I +  ++ + GL PD+ +Y  ++    +   +DEA ++    VE G KP    Y  +I+G C + +  +A   + +M 
Subjt:  PDVSTFNSLISVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMK

Query:  VKGHPPNRPVYTMLI
          G PP+   YT LI
Subjt:  VKGHPPNRPVYTMLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATAACGCTTTACTTTCTGCGCTTTGTGAGGTTAAGATGTTTCATGGGGCTTATGCGTTGATTCGGAGGATGATTAGAAAAGGGGTAGCCCCTGATAAGAAGACCTATGG
GATTCTTGTAAATGGGTGGTGCTCTGCGGGGAAGATGAGGGAAGCACAGGAGTTTCTGGAGGAGATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGCGACCTTT
TGGTTGAAGGATTGTTGAATGCAGGGTATTTAGAATCTGCCAAGAATATGGTTAGAAAAATGACCAAAGAAGGATCTGTGCCTGATGTATCAACCTTTAATTCTCTGATT
AGTGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAACATTTACCATGAGGTTTGCAAATTGGGGCTTTGCCCTGATATAAACACATACAAGATTTTGGTTCCTGC
AACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAAGCTCTTGCATTGCTCTGTCGAGGATGGGCATAAACCGTTTCCTAGTCTGTATGGACCGATCATTAAGGGAATGT
GTAGAAGGGGTCAGTTTGACGATGCGTTTTGCTTTTTCAATGATATGAAAGTTAAGGGACATCCACCAAATCGGCCGGTGTATACAATGTTGATAACAATGTGTGGGCGT
GGA
mRNA sequenceShow/hide mRNA sequence
TATAACGCTTTACTTTCTGCGCTTTGTGAGGTTAAGATGTTTCATGGGGCTTATGCGTTGATTCGGAGGATGATTAGAAAAGGGGTAGCCCCTGATAAGAAGACCTATGG
GATTCTTGTAAATGGGTGGTGCTCTGCGGGGAAGATGAGGGAAGCACAGGAGTTTCTGGAGGAGATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGCGACCTTT
TGGTTGAAGGATTGTTGAATGCAGGGTATTTAGAATCTGCCAAGAATATGGTTAGAAAAATGACCAAAGAAGGATCTGTGCCTGATGTATCAACCTTTAATTCTCTGATT
AGTGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAACATTTACCATGAGGTTTGCAAATTGGGGCTTTGCCCTGATATAAACACATACAAGATTTTGGTTCCTGC
AACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAAGCTCTTGCATTGCTCTGTCGAGGATGGGCATAAACCGTTTCCTAGTCTGTATGGACCGATCATTAAGGGAATGT
GTAGAAGGGGTCAGTTTGACGATGCGTTTTGCTTTTTCAATGATATGAAAGTTAAGGGACATCCACCAAATCGGCCGGTGTATACAATGTTGATAACAATGTGTGGGCGT
GGA
Protein sequenceShow/hide protein sequence
YNALLSALCEVKMFHGAYALIRRMIRKGVAPDKKTYGILVNGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKNMVRKMTKEGSVPDVSTFNSLI
SVICNSGEVDFCINIYHEVCKLGLCPDINTYKILVPATSKVGRIDEAFKLLHCSVEDGHKPFPSLYGPIIKGMCRRGQFDDAFCFFNDMKVKGHPPNRPVYTMLITMCGR
G