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MS020830 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020830
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1172:77345..77738
RNA-Seq ExpressionMS020830
SyntenyMS020830
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH05705.1 TatD related DNase [Prunus dulcis]1.5e-1942.19Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+K+K+  +L + KR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

BBN69274.1 TatD related DNase [Prunus dulcis]1.8e-2042.97Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ +K+  +L RWKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]6.8e-2042.19Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ +K+  +L +WKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]3.1e-2042.19Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPL GN +   FWNP+K+K+  +L +WKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]8.1e-2143.75Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ +K+  +L RWKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        S  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

TrEMBL top hitse value%identityAlignment
A0A5E4FU33 zf-RVT domain-containing protein (Fragment)1.5e-2042.19Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPL GN +   FWNP+K+K+  +L +WKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)3.9e-2143.75Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ +K+  +L RWKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        S  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

A0A5H2XQW2 TatD related DNase8.7e-2142.97Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ +K+  +L RWKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

M5WPQ5 Reverse transcriptase domain-containing protein5.1e-2142.97Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ EK+  +L +WKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)6.7e-2142.97Show/hide
Query:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI
        WP++Y GLPLGGN +   FWNP+ EK+  +L +WKR  L  GGRLTL   VL  IP YY++  +        V+ L    F W   ++G   HLVR   +
Subjt:  WPILYFGLPLGGNHKK-KFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNI

Query:  SLCREEGSFGIGRFLQWNKSLLAKWSWR
        +  +EEG  GIG   + N++L AKW WR
Subjt:  SLCREEGSFGIGRFLQWNKSLLAKWSWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATGGCCTATTTTGTATTTTGGGTTGCCTTTGGGTGGAAACCATAAAAAAAAATTTTGGAATCCCATCAAAGAAAAAATCATGAATAAGCTTGATAGATGGAAGAGATA
CCAACTTCCATGTGGAGGTAGATTGACCCTTTTCCTTTTTGTGCTTGGTTGCATCCCTCTATATTATCTGGCATTTGGTCGTTGTTCCAAATGCCAGTACAGATTGGTAG
ATAGCTTGAAAAGTATAACCTTCTTTTGGGGAGATAATCAAAAGGGTGCATTGAAGCATTTGGTTCGATGTTATAATATTTCTCTTTGCCGTGAGGAGGGAAGTTTTGGC
ATTGGTCGGTTTTTGCAATGGAATAAATCTTTGCTTGCTAAGTGGAGTTGGCGT
mRNA sequenceShow/hide mRNA sequence
TCATGGCCTATTTTGTATTTTGGGTTGCCTTTGGGTGGAAACCATAAAAAAAAATTTTGGAATCCCATCAAAGAAAAAATCATGAATAAGCTTGATAGATGGAAGAGATA
CCAACTTCCATGTGGAGGTAGATTGACCCTTTTCCTTTTTGTGCTTGGTTGCATCCCTCTATATTATCTGGCATTTGGTCGTTGTTCCAAATGCCAGTACAGATTGGTAG
ATAGCTTGAAAAGTATAACCTTCTTTTGGGGAGATAATCAAAAGGGTGCATTGAAGCATTTGGTTCGATGTTATAATATTTCTCTTTGCCGTGAGGAGGGAAGTTTTGGC
ATTGGTCGGTTTTTGCAATGGAATAAATCTTTGCTTGCTAAGTGGAGTTGGCGT
Protein sequenceShow/hide protein sequence
SWPILYFGLPLGGNHKKKFWNPIKEKIMNKLDRWKRYQLPCGGRLTLFLFVLGCIPLYYLAFGRCSKCQYRLVDSLKSITFFWGDNQKGALKHLVRCYNISLCREEGSFG
IGRFLQWNKSLLAKWSWR