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MS020833 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020833
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold1172:84585..84788
RNA-Seq ExpressionMS020833
SyntenyMS020833
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]7.8e-1564.18Show/hide
Query:  TISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIR
        TIS  G LSL  L++NE+ATVW YVVKNRLIPTS++S IKRN+ M+VY L+KG+EFN+ +LIR++I+
Subjt:  TISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIR

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]6.7e-0660.42Show/hide
Query:  VWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV
        +W YVVKN LI TS++S I++ +VM+VY LMKGIEFN+ +LIR++I V
Subjt:  VWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV

TrEMBL top hitse value%identityAlignment
A0A5A7V6J8 Uncharacterized protein5.1e-0437.31Show/hide
Query:  ISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV
        I+P G   L   NLN KA++W   VK +L PT H++ I   ++M+VYY+M+ +  +  + I + I V
Subjt:  ISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220073.8e-1564.18Show/hide
Query:  TISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIR
        TIS  G LSL  L++NE+ATVW YVVKNRLIPTS++S IKRN+ M+VY L+KG+EFN+ +LIR++I+
Subjt:  TISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIR

A0A6J1E204 uncharacterized protein LOC1110257023.2e-0660.42Show/hide
Query:  VWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV
        +W YVVKN LI TS++S I++ +VM+VY LMKGIEFN+ +LIR++I V
Subjt:  VWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCATATCGCCAAGGGGAACTCTTTCTTTGACACTGCTTAATCTTAATGAAAAGGCCACAGTGTGGTATTATGTTGTCAAGAACCGATTGATTCCTACCTCTCACAATTC
CTTCATCAAGCGAAACAAGGTGATGATGGTGTATTACCTAATGAAGGGGATCGAGTTCAACTACGACCAGCTTATAAGGGATCAAATTCGGGTT
mRNA sequenceShow/hide mRNA sequence
ACCATATCGCCAAGGGGAACTCTTTCTTTGACACTGCTTAATCTTAATGAAAAGGCCACAGTGTGGTATTATGTTGTCAAGAACCGATTGATTCCTACCTCTCACAATTC
CTTCATCAAGCGAAACAAGGTGATGATGGTGTATTACCTAATGAAGGGGATCGAGTTCAACTACGACCAGCTTATAAGGGATCAAATTCGGGTT
Protein sequenceShow/hide protein sequence
TISPRGTLSLTLLNLNEKATVWYYVVKNRLIPTSHNSFIKRNKVMMVYYLMKGIEFNYDQLIRDQIRV