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MS020839 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020839
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1172:159056..159277
RNA-Seq ExpressionMS020839
SyntenyMS020839
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010682933.1 PREDICTED: uncharacterized protein LOC104897695 [Beta vulgaris subsp. vulgaris]3.4e-1154.05Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD ++F RA   EC  +  IL  YE ASGQ +NFDKS V FS N+ D+RK  ++SL GVR V+   +YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

XP_019185981.1 PREDICTED: uncharacterized protein LOC109180726 [Ipomoea nil]2.0e-1151.35Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD  +FFRA   EC  ++W+L  Y  ASGQ VN+DKS VCFSTN     +  +  +LGVR  D   +YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

XP_021692476.1 uncharacterized protein LOC110673651 [Hevea brasiliensis]2.6e-1147.3Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD L FF+A   +   +R +LH+Y +A+GQ +NFDKS +CFS N+ D  ++ + ++L V   DNL  YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.0e-1251.35Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD L+F R+   EC  +R +L  Y  ASGQC+NF KSA+ FS N+   R++YLQ +L V+LV +   YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

XP_040957843.1 uncharacterized protein LOC121222024 [Gossypium hirsutum]9.8e-1150Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD ++F  A       ++ IL  YE++SGQCVNFDKS V FSTN +D  +E +  +LGVR  ++L +YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.5e-1251.35Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD L+F R+   EC  +R +L  Y  ASGQC+NF KSA+ FS N+   R++YLQ +L V+LV +   YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

A0A7J8NFE4 Uncharacterized protein (Fragment)8.1e-1148.65Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        F DD ++F  A       ++ IL  YE++SGQCVNFDKS+V FSTN +D  +E +  +LGVR  ++L +YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

A0A803PM68 Uncharacterized protein6.2e-1150Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD LVF  A   EC   + +L  Y +ASGQ VNF KS +CF   + D  K  L +L+GV++VDN  +YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

A0A803PY90 Uncharacterized protein8.1e-1148.65Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD LVF  A   EC  I+ +L+ YEL SGQC+N+DKS +C  + I  +    L + LGV LV+N  +YLG+P
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

A0A803Q3X2 Uncharacterized protein3.6e-1148.65Show/hide
Query:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP
        FADD L+F  AD   C   + +L+LY  ASGQ VN+ KS VCF  N+    ++ L S +GVR V+N  +YLGLP
Subjt:  FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGCAGATGATAGGCTTGTATTTTTTAGAGCTGATGCAGTGGAATGTTGGGAGATACGATGGATCCTCCATTTATATGAGCTTGCTTCAGGGCAATGTGTGAACTTTGA
TAAATCAGCAGTATGCTTTTCTACAAATATTCGAGATAATAGGAAAGAGTACCTCCAGTCTCTTCTTGGTGTTCGTTTGGTTGATAATCTTAGACAATATTTGGGTCTTC
CA
mRNA sequenceShow/hide mRNA sequence
TTTGCAGATGATAGGCTTGTATTTTTTAGAGCTGATGCAGTGGAATGTTGGGAGATACGATGGATCCTCCATTTATATGAGCTTGCTTCAGGGCAATGTGTGAACTTTGA
TAAATCAGCAGTATGCTTTTCTACAAATATTCGAGATAATAGGAAAGAGTACCTCCAGTCTCTTCTTGGTGTTCGTTTGGTTGATAATCTTAGACAATATTTGGGTCTTC
CA
Protein sequenceShow/hide protein sequence
FADDRLVFFRADAVECWEIRWILHLYELASGQCVNFDKSAVCFSTNIRDNRKEYLQSLLGVRLVDNLRQYLGLP