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MS020841 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020841
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVacuolar protein sorting-associated protein 62-like
Genome locationscaffold1172:200954..201067
RNA-Seq ExpressionMS020841
SyntenyMS020841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038434.1 vacuolar protein sorting-associated protein 62-like [Cucumis melo var. makuwa]5.5e-1076.32Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SDPQPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
TYJ96961.1 vacuolar protein sorting-associated protein 62-like [Cucumis melo var. makuwa]5.5e-1076.32Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SDPQPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
XP_004142542.1 uncharacterized protein LOC101216081 [Cucumis sativus]4.7e-0973.68Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SD QPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
XP_008443774.2 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103487283 [Cucumis melo]5.5e-1076.32Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SDPQPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
XP_022158672.1 uncharacterized protein LOC111025135 [Momordica charantia]1.8e-16100Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
TrEMBL top hitse value%identityAlignment
A0A1S3B8W1 LOW QUALITY PROTEIN: uncharacterized protein LOC1034872832.7e-1076.32Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SDPQPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
A0A5A7T4P3 Vacuolar protein sorting-associated protein 62-like2.7e-1076.32Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SDPQPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
A0A5D3BE80 Vacuolar protein sorting-associated protein 62-like2.7e-1076.32Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M GW CWC NGV DP DF  SDPQPFSLPSPLP WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
A0A6J1DXT9 uncharacterized protein LOC1110251358.6e-17100Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
A0A6J1JL63 uncharacterized protein LOC1114854173.1e-0663.16Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M G  CWC NG+ DP D   SDP+PFSLPS LP+WP G
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G04350.1 Plant protein of unknown function (DUF946)1.3e-0447.37Show/hide
Query:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG
        M G +C+  +      D   S+P+PFSLP+PLP WPQG
Subjt:  MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGGTGGAATTGTTGGTGCTGCAATGGCGTCGCCGATCCTCAAGATTTCTCCTTTTCAGATCCTCAACCCTTCTCTCTTCCTTCGCCGCTTCCCGATTGGCCTCA
AGGT
mRNA sequenceShow/hide mRNA sequence
ATGATCGGGTGGAATTGTTGGTGCTGCAATGGCGTCGCCGATCCTCAAGATTTCTCCTTTTCAGATCCTCAACCCTTCTCTCTTCCTTCGCCGCTTCCCGATTGGCCTCA
AGGT
Protein sequenceShow/hide protein sequence
MIGWNCWCCNGVADPQDFSFSDPQPFSLPSPLPDWPQG