CuGenDBv2

Gene ID	MS020893
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit a, chloroplastic
Genome location	scaffold382:396415..396632
RNA-Seq Expression	MS020893
Synteny	MS020893
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR035908 - ATP synthase, F0 complex, subunit A superfamily IPR045082 - ATP synthase, F0 complex, subunit A, bacterial/chloroplast

Homology

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GenBank top hits

e value

%identity

Alignment

AFU97024.1 AtpI, partial [Humiria balsamifera]

8.5e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LA L  VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

AKZ21710.1 ATP synthase CF0 A subunit [Physalis virginiana]

8.5e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LA L  VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

YP_009108916.1 ATP synthase CF0 subunit IV [Corallorhiza bulbosa]

1.1e-19

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

YP_009109122.1 ATP synthase CF0 subunit IV [Corallorhiza trifida]

1.1e-19

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

YP_009424846.1 ATPase subunit IV [Gastrochilus japonicus]

1.1e-19

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0UR98 ATP synthase CF0 subunit IV

5.3e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

A0A0K1Z6R6 ATP synthase CF0 A subunit

4.1e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LA L  VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

A0A481XSI0 ATP synthase CF0 A chain

5.3e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

A0A5J6KIE8 ATP synthase CF0 subunit IV

5.3e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

K4KDB7 ATP synthase subunit a, chloroplastic (Fragment)

4.1e-20

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LA L  VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

SwissProt top hits

e value

%identity

Alignment

A4GYP6 ATP synthase subunit a, chloroplastic

3.2e-22

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKIIELPHGELAAPT DINTTV LA L  +AYFY GL KKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

Q14FG9 ATP synthase subunit a, chloroplastic

3.2e-22

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKIIELPHGELAAPT DINTTV LA L  +AYFY GL KKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

Q3BAQ4 ATP synthase subunit a, chloroplastic

1.4e-22

81.54

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LPHGELAAPT DINTTV LAL   VAYFY GLRKKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

Q3V546 ATP synthase subunit a, chloroplastic

4.2e-22

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WK+IELPHGELAAPT DINTTV LAL   VAYFY GL KKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

Q4FGF8 ATP synthase subunit a, chloroplastic

4.2e-22

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WK+IELPHGELAAPT DINTTV LAL   VAYFY GL KKGLGYFG+YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLAL-NFVAYFYVGLRKKGLGYFGQYIQPTPILL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00150.1 ATPase, F0 complex, subunit A protein

1.6e-21

76.92

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Query:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL
        +N S ALL WKII+LP GELAAPT DINTTV LA L  VAYFY GL KKGLGYF +YIQPTPILL
Subjt:  TNGSEALLHWKIIELPHGELAAPTTDINTTVTLA-LNFVAYFYVGLRKKGLGYFGQYIQPTPILL

Sequences

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CDS sequence

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CGAATGAATTCAAGGATATGTACGAATGGGTCAGAGGCTCTTTTACATTGGAAAATCATAGAGTTACCTCACGGAGAGTTAGCCGCACCCACAACTGATATAAATACTAC
CGTTACTTTAGCTTTAAACTTTGTAGCATATTTCTATGTGGGTCTTAGAAAAAAAGGATTAGGTTATTTTGGTCAATACATTCAACCAACTCCAATCCTTCTG

mRNA sequence

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Protein sequence

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RMNSRICTNGSEALLHWKIIELPHGELAAPTTDINTTVTLALNFVAYFYVGLRKKGLGYFGQYIQPTPILL

MS020893 (gene) of Bitter gourd (TR) v1 genome