; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020895 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020895
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsyntaxin-81
Genome locationscaffold382:397960..398776
RNA-Seq ExpressionMS020895
SyntenyMS020895
Gene Ontology termsGO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133683.1 syntaxin-81 [Momordica charantia]2.1e-7289.83Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE
        VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKP SA+T EY+NTEL+E   FEHEPVRAQQQ  LDDETR     L VELTSLLDAVQETE
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE

Query:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFL+LFLFVLTFSI FLDWYS
Subjt:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

XP_022961294.1 syntaxin-81-like isoform X1 [Cucurbita moschata]1.6e-7288.64Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDIINKAVPRRKPNQV KPRSA+ P YNN EL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQETET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKEL+QAIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

XP_022990738.1 syntaxin-81-like isoform X1 [Cucurbita maxima]2.4e-7187.5Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDIINKAVPRRKPNQV KPRSA+ P YNN EL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQE ET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKEL+ AIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

XP_022993065.1 syntaxin-81-like [Cucurbita maxima]3.1e-7188.07Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDII+KAVPRRKPNQ+ KPRSA+T  YN TEL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQETET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

XP_023520591.1 syntaxin-81-like [Cucurbita pepo subsp. pepo]4.3e-7389.2Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDIINKAVPRRKPNQV KPRSA+ P YNN EL+E  TFEH+PVRAQQQ LDDETR     L VELTSLLDAVQETET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKEL+QAIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

TrEMBL top hitse value%identityAlignment
A0A6J1BZU2 syntaxin-811.0e-7289.83Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE
        VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKP SA+T EY+NTEL+E   FEHEPVRAQQQ  LDDETR     L VELTSLLDAVQETE
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE

Query:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFL+LFLFVLTFSI FLDWYS
Subjt:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

A0A6J1FLA6 syntaxin-81-like1.5e-7188.07Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDII+KAVPRRKPNQ+ KPRSA+T  YN TEL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQETET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

A0A6J1HDQ6 syntaxin-81-like isoform X17.9e-7388.64Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDIINKAVPRRKPNQV KPRSA+ P YNN EL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQETET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKEL+QAIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

A0A6J1JU56 syntaxin-81-like isoform X11.1e-7187.5Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDIINKAVPRRKPNQV KPRSA+ P YNN EL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQE ET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKEL+ AIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

A0A6J1K136 syntaxin-81-like1.5e-7188.07Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET
        VLILSE+LHSVTSQFDKLRAIRFQDII+KAVPRRKPNQ+ KPRSA+T  YN TEL+E   FEH+PVRAQQQ LDDETR     L VELTSLLDAVQETET
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETET

Query:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSI FLDWYS
Subjt:  KMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

SwissProt top hitse value%identityAlignment
P59277 Syntaxin-811.0e-5671.75Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE
        VLILSE+LHSVT+QFD+LRA RFQDIIN+A+PRRKP +V K  +       N+E  E    + +P R QQQ  LDDET    Q L VEL++LLD  ++TE
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE

Query:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        TKMVEMSALNHLM+THVLQQAQQIEFLY+QAVEATKNVELGNKELSQAIQRNSSSRTFLLLF FVLTFS+ FLDWYS
Subjt:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS

Q4VBI7 Syntaxin-181.1e-1531.64Show/hide
Query:  ILSERLHSVTSQFDKLRAIRFQDIIN-KAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVF---FQILLVELTSLLDAVQET
        ++   L  V   + + RA+R + +++ K + R +P Q+   +     E N+  + +      E  R +     +E ++F    Q L+ E+ SLLD V++ 
Subjt:  ILSERLHSVTSQFDKLRAIRFQDIIN-KAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVF---FQILLVELTSLLDAVQET

Query:  ETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY
        E K+VE+S L  + S  VLQQ  +I+ +++  V AT+NV+ GN+++ +AI+ N+  R ++L FL + +FS+ FLDWY
Subjt:  ETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY

Q68FW4 Syntaxin-183.7e-1135.25Show/hide
Query:  KPRSADTPEYNNTELK-ETTTFEHEPVRAQQQPLDDETRVF---FQILLVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKN
        KP + D PE    E + E  T+       +  P  +E ++F    Q L+ E+ SL D V++ E K+VE+S L  + +  VLQQ  +I+ +++  V AT+N
Subjt:  KPRSADTPEYNNTELK-ETTTFEHEPVRAQQQPLDDETRVF---FQILLVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKN

Query:  VELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY
        ++ GN+++ +AI+ N+  R ++L FL + +FS+ FLDWY
Subjt:  VELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY

Q8VDS8 Syntaxin-181.3e-1129.23Show/hide
Query:  LSERLHSVTSQFDKLRAIRFQDIIN-KAVPRRKPNQVTK---------PRSADTPEYNN---TELKETTTFEHEPV-------RAQQQPLDDETRVF---
        + + L  V   + + RAIR + +++ K + + +P   TK         P++A           EL E    E +P        + + +   +E ++F   
Subjt:  LSERLHSVTSQFDKLRAIRFQDIIN-KAVPRRKPNQVTK---------PRSADTPEYNN---TELKETTTFEHEPV-------RAQQQPLDDETRVF---

Query:  FQILLVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY
         Q L+ E+ SL D V++ E K+VE+S L  + +  VLQQ  +I+ +++  V AT+N++ GN+++ +AI+ N+  R ++L FL + +FS+ FLDWY
Subjt:  FQILLVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY

Q9P2W9 Syntaxin-189.8e-1239.36Show/hide
Query:  QILLVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY
        Q L+ E+ SL D V++ E ++VE+S L  + +  VLQQ  +I+ +++  V AT+N++ GN+++ +AI+ N+  R ++L FL + +FS+ FLDWY
Subjt:  QILLVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWY

Arabidopsis top hitse value%identityAlignment
AT1G51740.1 syntaxin of plants 817.1e-5871.75Show/hide
Query:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE
        VLILSE+LHSVT+QFD+LRA RFQDIIN+A+PRRKP +V K  +       N+E  E    + +P R QQQ  LDDET    Q L VEL++LLD  ++TE
Subjt:  VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQP-LDDETRVFFQILLVELTSLLDAVQETE

Query:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS
        TKMVEMSALNHLM+THVLQQAQQIEFLY+QAVEATKNVELGNKELSQAIQRNSSSRTFLLLF FVLTFS+ FLDWYS
Subjt:  TKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTACTAATTTTGAGTGAGAGGCTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGATTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAA
CCAGGTAACTAAACCTCGTTCTGCAGATACCCCTGAATATAATAATACGGAGCTGAAGGAAACTACTACTTTTGAGCATGAACCTGTCCGAGCCCAACAGCAACCGTTGG
ATGATGAAACTCGTGTTTTCTTCCAAATTTTGCTGGTTGAGTTGACTAGTCTTCTTGATGCAGTCCAAGAAACAGAAACTAAGATGGTTGAGATGTCTGCTTTGAATCAC
CTTATGTCTACCCACGTTTTGCAGCAAGCACAACAGATTGAATTTCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTTGAGCTCGGTAATAAAGAACTTTCCCAAGC
AATTCAGCGGAATAGCAGCAGCAGAACGTTCCTTCTTCTTTTTCTATTTGTGCTCACCTTTTCAATTCGTTTTCTTGATTGGTACAGT
mRNA sequenceShow/hide mRNA sequence
GTACTAATTTTGAGTGAGAGGCTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGATTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAA
CCAGGTAACTAAACCTCGTTCTGCAGATACCCCTGAATATAATAATACGGAGCTGAAGGAAACTACTACTTTTGAGCATGAACCTGTCCGAGCCCAACAGCAACCGTTGG
ATGATGAAACTCGTGTTTTCTTCCAAATTTTGCTGGTTGAGTTGACTAGTCTTCTTGATGCAGTCCAAGAAACAGAAACTAAGATGGTTGAGATGTCTGCTTTGAATCAC
CTTATGTCTACCCACGTTTTGCAGCAAGCACAACAGATTGAATTTCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTTGAGCTCGGTAATAAAGAACTTTCCCAAGC
AATTCAGCGGAATAGCAGCAGCAGAACGTTCCTTCTTCTTTTTCTATTTGTGCTCACCTTTTCAATTCGTTTTCTTGATTGGTACAGT
Protein sequenceShow/hide protein sequence
VLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPRSADTPEYNNTELKETTTFEHEPVRAQQQPLDDETRVFFQILLVELTSLLDAVQETETKMVEMSALNH
LMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIRFLDWYS