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MS020901 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020901
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationscaffold382:465673..465891
RNA-Seq ExpressionMS020901
SyntenyMS020901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]9.3e-1463.64Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAKEGKV
        ML+S  FRFIL LT V+   +  ++AARVP  YWEQM+PKKLPSPSSAPSKGTN+VA    K +KV+G LPAK+G V
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAKEGKV

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1264.38Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAK
        M +S + RFI +L  V+   +  SEAARVP +YWEQM+PKKLP+PSSAPSKGTNSVA    K VKVDG LPAK
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAK

PPR86316.1 hypothetical protein GOBAR_AA34373 [Gossypium barbadense]4.8e-1055.84Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV
        MLVS + + +L+L   ++A   +SEA+R P+ YWEQM+PKKLP+PSS+PSKGTNSV    +KAVK D  LP+ +GKV
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV

TYH28223.1 hypothetical protein ES288_A02G128000v1 [Gossypium darwinii]4.8e-1055.84Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV
        MLVS + + +L+L   ++A   +SEA+R P+ YWEQM+PKKLP+PSS+PSKGTNSV    +KAVK D  LP+ +GKV
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]1.2e-1362.34Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAKEGKV
        ML++  FRFIL LT ++   +  S+AARVP  YWEQM+PKKLPSPSSAPSKGTN+VA    K +KV+G LPAK+G V
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAKEGKV

TrEMBL top hitse value%identityAlignment
A0A2P5W5E0 Uncharacterized protein2.3e-1055.84Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV
        MLVS + + +L+L   ++A   +SEA+R P+ YWEQM+PKKLP+PSS+PSKGTNSV    +KAVK D  LP+ +GKV
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV

A0A5D2HDH0 Uncharacterized protein2.3e-1055.84Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV
        MLVS + + +L+L   ++A   +SEA+R P+ YWEQM+PKKLP+PSS+PSKGTNSV    +KAVK D  LP+ +GKV
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV

A0A5D2LK08 Uncharacterized protein1.1e-0954.55Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV
        MLVS + + +L+ +  ++A   +SEA+R P  YWEQM+PKKLP+PSS+PSKGTNSV    +KAVK D  LP+ +GKV
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV

A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR55.9e-1462.34Show/hide
Query:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAKEGKV
        ML++  FRFIL LT ++   +  S+AARVP  YWEQM+PKKLPSPSSAPSKGTN+VA    K +KV+G LPAK+G V
Subjt:  MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVA----KAVKVDGILPAKEGKV

A0A803PR73 Uncharacterized protein6.7e-1062.9Show/hide
Query:  VVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV
        ++IA   +SEA+R+P+EY++QMMPKKLPSPSS+PSKGTNSV    +KAVK D  LP+ +GKV
Subjt:  VVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSV----AKAVKVDGILPAKEGKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTTTCTTCGAAGTTTAGATTCATTCTGGTCTTAACGGCTGTTGTTATCGCCCTCGCCACTGTCTCGGAGGCGGCGAGGGTGCCAAGAGAGTATTGGGAGCAAAT
GATGCCAAAGAAGCTTCCATCGCCGTCCTCGGCACCATCGAAAGGGACCAACTCTGTGGCAAAGGCTGTGAAGGTTGATGGGATATTGCCCGCAAAGGAGGGGAAGGTT
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTTTCTTCGAAGTTTAGATTCATTCTGGTCTTAACGGCTGTTGTTATCGCCCTCGCCACTGTCTCGGAGGCGGCGAGGGTGCCAAGAGAGTATTGGGAGCAAAT
GATGCCAAAGAAGCTTCCATCGCCGTCCTCGGCACCATCGAAAGGGACCAACTCTGTGGCAAAGGCTGTGAAGGTTGATGGGATATTGCCCGCAAAGGAGGGGAAGGTT
Protein sequenceShow/hide protein sequence
MLVSSKFRFILVLTAVVIALATVSEAARVPREYWEQMMPKKLPSPSSAPSKGTNSVAKAVKVDGILPAKEGKV