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MS020903 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020903
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolyprotein
Genome locationscaffold382:484506..484876
RNA-Seq ExpressionMS020903
SyntenyMS020903
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041674.1 movement protein [Cucumis melo var. makuwa]1.2e-2144Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ + +EFT + LL  +++ + + KFKY++IGCVQVA+KPL R GLD PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL++G    +  P++T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

KAA0066201.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.1e-2244.8Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ +  EFT +NLL  +++ + + KFKY++IGCVQVA+KPL R G D PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL+KG    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.6e-2144.8Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q++II I E+N+ +  EFT + LL  +++L+ + +FKY++IGCVQVA+KPL R GLD PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL++G    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

TYK01213.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.1e-2244.8Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ +  EFT +NLL  +++ + + KFKY++IGCVQVA+KPL R G D PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL+KG    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

TYK19826.1 polyprotein [Cucumis melo var. makuwa]1.8e-2245.6Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ +  EFT +NLL  +++   + KFKY++IGCVQVA+KPL R GLD PVY+ALK ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL++G    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

TrEMBL top hitse value%identityAlignment
A0A0A0M024 Uncharacterized protein2.6e-2245.6Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +  KE+Y INTFNF Q+++I I E+N+ +  EFTT+ LL  +++   + KFKY++I CVQVA+KPL R GLD  VY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L I+QSNL++G    +  PNIT+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

A0A5A7VKK8 Enzymatic polyprotein2.0e-2244.8Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ +  EFT +NLL  +++ + + KFKY++IGCVQVA+KPL R G D PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL+KG    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

A0A5D3BN76 Enzymatic polyprotein2.0e-2244.8Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ +  EFT +NLL  +++ + + KFKY++IGCVQVA+KPL R G D PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL+KG    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

A0A5D3C4I7 Movement protein5.8e-2244Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ + +EFT + LL  +++ + + KFKY++IGCVQVA+KPL R GLD PVY+AL+ ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL++G    +  P++T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

A0A5D3D8B2 Polyprotein8.9e-2345.6Show/hide
Query:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---
        +L  W+IP +   ++Y INTFNF Q+++I I E+N+ +  EFT +NLL  +++   + KFKY++IGCVQVA+KPL R GLD PVY+ALK ++    T   
Subjt:  KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLT---

Query:  LEIVQSNLKKGQASSSVDPNITLQM
        L IVQSNL++G    +  P +T+ +
Subjt:  LEIVQSNLKKGQASSSVDPNITLQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCTCTCTATCTGGAATATTCCTCATGTTCTTAAAAAAGAAATTTATCATATCAACACTTTCAACTTTGGTCAGAAAAATATCATAGAGATTGTGGAGAAAAATCTCCC
TATTGCTCATGAATTTACTACTCTGAATTTACTTACTCGGAAATCAATTTTAGAACACCAAACGAAATTCAAATATATTTATATCGGTTGCGTTCAAGTTGCTGTCAAAC
CTCTATTAAGAAGAGGTTTAGACAACCCTGTTTATGTTGCCTTAAAGAGACAAAAGGCAACTTTTCTGACTCTAGAAATCGTGCAATCAAACCTTAAAAAAGGACAAGCT
TCTTCAAGTGTAGACCCGAATATTACATTGCAGATG
mRNA sequenceShow/hide mRNA sequence
AAGCTCTCTATCTGGAATATTCCTCATGTTCTTAAAAAAGAAATTTATCATATCAACACTTTCAACTTTGGTCAGAAAAATATCATAGAGATTGTGGAGAAAAATCTCCC
TATTGCTCATGAATTTACTACTCTGAATTTACTTACTCGGAAATCAATTTTAGAACACCAAACGAAATTCAAATATATTTATATCGGTTGCGTTCAAGTTGCTGTCAAAC
CTCTATTAAGAAGAGGTTTAGACAACCCTGTTTATGTTGCCTTAAAGAGACAAAAGGCAACTTTTCTGACTCTAGAAATCGTGCAATCAAACCTTAAAAAAGGACAAGCT
TCTTCAAGTGTAGACCCGAATATTACATTGCAGATG
Protein sequenceShow/hide protein sequence
KLSIWNIPHVLKKEIYHINTFNFGQKNIIEIVEKNLPIAHEFTTLNLLTRKSILEHQTKFKYIYIGCVQVAVKPLLRRGLDNPVYVALKRQKATFLTLEIVQSNLKKGQA
SSSVDPNITLQM