; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020908 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020908
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold382:542530..542961
RNA-Seq ExpressionMS020908
SyntenyMS020908
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592136.1 Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5073.43Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        P  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   ISDDLESLIGK  +DF+EFLSLY+SISE NR G  EEIESDLLNAFQVFD+N DGFI C+EL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         NVL RLGLWD+ RC RDC  MIGAFD++ DGRLDF+EFKNMM
Subjt:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM

KAG7025009.1 Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-5174.13Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        P  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   ISDDLESLIGK  +DF+EFLSLY+SISE NR G  EEIESDLLNAFQVFD+NRDGFI C+EL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         NVL RLGLWD+ RC RDC  MIGAFD++ DGRLDF+EFKNMM
Subjt:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM

XP_022139705.1 probable calcium-binding protein CML44 [Momordica charantia]5.4e-7497.92Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQI DDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMMLS
        RNVLARLGLWDERCGRDCSSMIGAFD NFDGRLDFQEFKN+MLS
Subjt:  RNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMMLS

XP_022976028.1 probable calcium-binding protein CML44 [Cucurbita maxima]1.3e-5174.83Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        P  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   ISDDLESLIGK K+DF+EFLSLY+SISE NR G  EEIESDLLNAFQVFD+NRDGFI C+EL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         NVL RLGLWD+ RC RDC  MIGAFD++ DGRLDF+EFKNMM
Subjt:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM

XP_023536413.1 probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo]6.5e-5174.13Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        P  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   ISDDLESLIGK  +DF+EFLSLY+SISE NR G  EEIESDLLNAFQVFD+NRDGFI C+EL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         NVL RLGLWD+ RC RDC  MIGAFD++ DGRLDF+EFKNMM
Subjt:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM

TrEMBL top hitse value%identityAlignment
A0A2N9GA67 Uncharacterized protein1.6e-3958.67Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQIS-DDLESLIGKCKLDFEEFLSLYKSISERNRAGA-------EEEIESDLLNAFQVFDQNRD
        P+  +DL RIFE LD NGDG +S+EELN LL+ IG   IS ++LES++GK  LD  EFLS + SIS++N + +       EE  ESDL+ AF+VFD N D
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQIS-DDLESLIGKCKLDFEEFLSLYKSISERNRAGA-------EEEIESDLLNAFQVFDQNRD

Query:  GFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        GFI C+EL+NVL+RLGLWDE  GRDC SMI  +D N DG+LDF+EFKNMM
Subjt:  GFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

A0A6J1CD20 probable calcium-binding protein CML442.6e-7497.92Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQI DDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMMLS
        RNVLARLGLWDERCGRDCSSMIGAFD NFDGRLDFQEFKN+MLS
Subjt:  RNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMMLS

A0A6J1FD73 probable calcium-binding protein CML442.6e-5073.43Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        P  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   ISDDLESLIGK  +DF+EFLSLY+SISE NR G  EEIESDLLNAFQVFD+NRDGFI C+EL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         NVL RL LWD+ RC RDC  MIGAFD++ DGRLDF+EFKNMM
Subjt:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM

A0A6J1IKW9 probable calcium-binding protein CML446.3e-5274.83Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL
        P  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   ISDDLESLIGK K+DF+EFLSLY+SISE NR G  EEIESDLLNAFQVFD+NRDGFI C+EL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEEL

Query:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         NVL RLGLWD+ RC RDC  MIGAFD++ DGRLDF+EFKNMM
Subjt:  RNVLARLGLWDE-RCGRDCSSMIGAFDINFDGRLDFQEFKNMM

A0A6P5ZL18 probable calcium-binding protein CML444.2e-4057.67Show/hide
Query:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNR----------AGAEEEIE----------SDL
        PL+ +DLQRIFE LD NGDGF+S+EELN LL+ IG     ++LESL+GK  LDF+EFL  Y SIS +N           AG+EEE+E          SDL
Subjt:  PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNR----------AGAEEEIE----------SDL

Query:  LNAFQVFDQNRDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMML
          AF+VFD N DGFI CEEL+NVL RLGLWDE  G+DC SMI  +D N DG +DF+EFKNMML
Subjt:  LNAFQVFDQNRDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMML

SwissProt top hitse value%identityAlignment
Q0JC44 Probable calcium-binding protein CML226.5e-2243.42Show/hide
Query:  ASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCK------LDFEEFLSLYKSI------SERNRAGAEEEIE-SDLLNAFQVFDQN
        A++L R+FE  D NGDG ++ EEL   L  +G    +D+L ++I +        +D EEF  LY+SI      S+  RA  EEE E  D+  AF+VFD N
Subjt:  ASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCK------LDFEEFLSLYKSI------SERNRAGAEEEIE-SDLLNAFQVFDQN

Query:  RDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
         DG+I  +EL  VLA LGL   R   +C  MIG  D + DGR+DF EF  MM
Subjt:  RDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

Q9LPK5 Probable calcium-binding protein CML442.8e-2542.57Show/hide
Query:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQ-ISDDLESLIGKCKLDFEEFLSLY-----KSISERNRAGAEEEIESDLLNAFQVFDQNRDGFI
        +T +DL+R+F+TLD N DG ++++EL  +LD +G  +   D+LE ++GK  LD +EFL  Y      S   +       + +  +  AF VFD N DG+I
Subjt:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQ-ISDDLESLIGKCKLDFEEFLSLY-----KSISERNRAGAEEEIESDLLNAFQVFDQNRDGFI

Query:  CCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMML
          EELR+VL RLG  +E    DC  MI   D N DG +DF+EFKNM+L
Subjt:  CCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMML

Q9SRR7 Calmodulin-like protein 34.1e-2445.83Show/hide
Query:  SDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKL------DFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCE
        ++L RIF+  D NGDG ++ +ELN  L+++G      DL  +I K  L      D EEF  LY++I E      E + E D+  AF VFDQNRDGFI  E
Subjt:  SDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKL------DFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCE

Query:  ELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        ELR+VLA LGL   R   DC  MI   D++ DG ++F+EFK MM
Subjt:  ELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

Q9SU00 Calmodulin-like protein 26.5e-2241.26Show/hide
Query:  DLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKC------KLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEE
        +L R+F+  D NGDG ++  EL     S+G     +++  +I K        +D +EF SLY+ + E      E+E E D+  AF+VFDQN DGFI  EE
Subjt:  DLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKC------KLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEE

Query:  LRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        LR+VLA +GL   R   DC  MI   D++ DG ++F+EFK MM
Subjt:  LRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

Q9SVG9 Calcium-binding protein CML423.5e-2342.77Show/hide
Query:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLI------GKCKLDFEEFLSLYKSISERNRAGA------------EEEIESDLLNA
        L A  LQRIF+  D NGDGF++VEEL++ L  +G      DL+S +      G   L+F++F SL+K++ +    GA              E ESDL  A
Subjt:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLI------GKCKLDFEEFLSLYKSISERNRAGA------------EEEIESDLLNA

Query:  FQVFDQNRDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        F+VFD+N DGFI   EL+ VL +LGL +         MI + D N DGR+DF EFKNMM
Subjt:  FQVFDQNRDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

Arabidopsis top hitse value%identityAlignment
AT1G21550.1 Calcium-binding EF-hand family protein2.0e-2642.57Show/hide
Query:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQ-ISDDLESLIGKCKLDFEEFLSLY-----KSISERNRAGAEEEIESDLLNAFQVFDQNRDGFI
        +T +DL+R+F+TLD N DG ++++EL  +LD +G  +   D+LE ++GK  LD +EFL  Y      S   +       + +  +  AF VFD N DG+I
Subjt:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQ-ISDDLESLIGKCKLDFEEFLSLY-----KSISERNRAGAEEEIESDLLNAFQVFDQNRDGFI

Query:  CCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMML
          EELR+VL RLG  +E    DC  MI   D N DG +DF+EFKNM+L
Subjt:  CCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMML

AT2G43290.1 Calcium-binding EF-hand family protein1.4e-2241.67Show/hide
Query:  SDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCK------LDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCE
        S+L+R+F+  D NGDG ++ EELN  L+++G      DL  +I K        +D +EF SLY SI + +    E E E D+ +AF VFDQ+ DGFI  E
Subjt:  SDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCK------LDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCE

Query:  ELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        EL++V+A LGL   +    C  MI   D + DGR++++EF  MM
Subjt:  ELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

AT3G07490.1 ARF-GAP domain 112.9e-2545.83Show/hide
Query:  SDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKL------DFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCE
        ++L RIF+  D NGDG ++ +ELN  L+++G      DL  +I K  L      D EEF  LY++I E      E + E D+  AF VFDQNRDGFI  E
Subjt:  SDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKL------DFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCE

Query:  ELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        ELR+VLA LGL   R   DC  MI   D++ DG ++F+EFK MM
Subjt:  ELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

AT4G12860.1 EF hand calcium-binding protein family4.6e-2341.26Show/hide
Query:  DLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKC------KLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEE
        +L R+F+  D NGDG ++  EL     S+G     +++  +I K        +D +EF SLY+ + E      E+E E D+  AF+VFDQN DGFI  EE
Subjt:  DLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKC------KLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEE

Query:  LRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        LR+VLA +GL   R   DC  MI   D++ DG ++F+EFK MM
Subjt:  LRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM

AT4G20780.1 calmodulin like 422.5e-2442.77Show/hide
Query:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLI------GKCKLDFEEFLSLYKSISERNRAGA------------EEEIESDLLNA
        L A  LQRIF+  D NGDGF++VEEL++ L  +G      DL+S +      G   L+F++F SL+K++ +    GA              E ESDL  A
Subjt:  LTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLI------GKCKLDFEEFLSLYKSISERNRAGA------------EEEIESDLLNA

Query:  FQVFDQNRDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM
        F+VFD+N DGFI   EL+ VL +LGL +         MI + D N DGR+DF EFKNMM
Subjt:  FQVFDQNRDGFICCEELRNVLARLGLWDERCGRDCSSMIGAFDINFDGRLDFQEFKNMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCATTAACCGCCTCCGATTTGCAGAGGATCTTCGAGACGCTCGACAGTAATGGCGACGGATTCTTGAGCGTGGAGGAGCTCAATCGCCTGCTCGACAGCATCGGCGATGG
CCAAATCTCCGACGATCTCGAGTCGTTGATCGGCAAATGCAAGCTTGATTTTGAAGAATTCTTGTCTCTATACAAATCCATATCGGAGAGAAACAGAGCAGGCGCGGAAG
AGGAAATTGAGAGCGATCTTTTGAATGCGTTCCAAGTGTTCGATCAAAATCGCGATGGATTTATTTGTTGCGAGGAGCTTCGGAATGTGCTGGCGAGGCTAGGGCTGTGG
GATGAGCGCTGCGGCCGCGATTGCAGCAGCATGATTGGCGCATTCGATATAAATTTCGATGGACGGCTTGATTTTCAGGAGTTCAAGAACATGATGCTCTCT
mRNA sequenceShow/hide mRNA sequence
CCATTAACCGCCTCCGATTTGCAGAGGATCTTCGAGACGCTCGACAGTAATGGCGACGGATTCTTGAGCGTGGAGGAGCTCAATCGCCTGCTCGACAGCATCGGCGATGG
CCAAATCTCCGACGATCTCGAGTCGTTGATCGGCAAATGCAAGCTTGATTTTGAAGAATTCTTGTCTCTATACAAATCCATATCGGAGAGAAACAGAGCAGGCGCGGAAG
AGGAAATTGAGAGCGATCTTTTGAATGCGTTCCAAGTGTTCGATCAAAATCGCGATGGATTTATTTGTTGCGAGGAGCTTCGGAATGTGCTGGCGAGGCTAGGGCTGTGG
GATGAGCGCTGCGGCCGCGATTGCAGCAGCATGATTGGCGCATTCGATATAAATTTCGATGGACGGCTTGATTTTCAGGAGTTCAAGAACATGATGCTCTCT
Protein sequenceShow/hide protein sequence
PLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQISDDLESLIGKCKLDFEEFLSLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEELRNVLARLGLW
DERCGRDCSSMIGAFDINFDGRLDFQEFKNMMLS