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MS020919 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020919
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGPI-anchored protein LLG1-like
Genome locationscaffold382:617540..617902
RNA-Seq ExpressionMS020919
SyntenyMS020919
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039307 - GPI-anchored protein LORELEI-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139390.1 GPI-anchored protein LLG1-like [Momordica charantia]9.9e-6199.15Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSC+LTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSWL
        SSAMILASGLVLLLSWL
Subjt:  SSAMILASGLVLLLSWL

XP_023525699.1 GPI-anchored protein LLG1-like isoform X1 [Cucurbita pepo subsp. pepo]5.6e-4881.03Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTE +CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GLACP +P  S+PNS PL K P
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSW
        S A+I+ASGLVLL SW
Subjt:  SSAMILASGLVLLLSW

XP_023525700.1 GPI-anchored protein LLG1-like isoform X2 [Cucurbita pepo subsp. pepo]5.6e-4881.03Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTE +CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GLACP +P  S+PNS PL K P
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSW
        S A+I+ASGLVLL SW
Subjt:  SSAMILASGLVLLLSW

XP_023525701.1 GPI-anchored protein LLG1-like isoform X3 [Cucurbita pepo subsp. pepo]5.6e-4881.03Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTE +CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GLACP +P  S+PNS PL K P
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSW
        S A+I+ASGLVLL SW
Subjt:  SSAMILASGLVLLLSW

XP_023525702.1 GPI-anchored protein LLG1-like isoform X4 [Cucurbita pepo subsp. pepo]5.6e-4880.34Show/hide
Query:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKC
        +ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTE +CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GLACP +P  S+PNS PL K 
Subjt:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKC

Query:  PSSAMILASGLVLLLSW
        PS A+I+ASGLVLL SW
Subjt:  PSSAMILASGLVLLLSW

TrEMBL top hitse value%identityAlignment
A0A6J1CC72 GPI-anchored protein LLG1-like4.8e-6199.15Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSC+LTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSWL
        SSAMILASGLVLLLSWL
Subjt:  SSAMILASGLVLLLSWL

A0A6J1FNF9 GPI-anchored protein LLG1-like isoform X21.0e-4779.31Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSP+LCCSALTE +CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GL CP +P  S+PNS PL KC 
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSW
        S A+I+ASGLVLL SW
Subjt:  SSAMILASGLVLLLSW

A0A6J1FS74 GPI-anchored protein LLG1-like isoform X11.0e-4779.31Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTIITSKCKGPLYSP+LCCSALTE +CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GL CP +P  S+PNS PL KC 
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSW
        S A+I+ASGLVLL SW
Subjt:  SSAMILASGLVLLLSW

A0A6J1IX37 GPI-anchored protein LLG1-like isoform X41.8e-4778.63Show/hide
Query:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKC
        +ACPVSFEFLNYTI+TSKCKGPLYSP+LCCSALTE  CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GLACP +P  S+PNS PL KC
Subjt:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKC

Query:  PSSAMILASGLVLLLSW
         S A+I+ASGLVLL SW
Subjt:  PSSAMILASGLVLLLSW

A0A6J1J2M1 GPI-anchored protein LLG1-like isoform X11.8e-4779.31Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP
        ACPVSFEFLNYTI+TSKCKGPLYSP+LCCSALTE  CPYVD +NDMTT CA TMFSYINL+GKYPPGLFS+ CREGD+GLACP +P  S+PNS PL KC 
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSW
        S A+I+ASGLVLL SW
Subjt:  SSAMILASGLVLLLSW

SwissProt top hitse value%identityAlignment
B3GS44 GPI-anchored protein LORELEI5.1e-2850Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPT-SSNPNSAPLLKCP
        C V+FE+++Y ++T +CKGP +  K CCSA  EFACPYV  +NDM + CA TMFSY+N+YG YP GLF+NECRE   GL CPL P  S N N++     P
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPT-SSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSWLV
            +L S    + + LV
Subjt:  SSAMILASGLVLLLSWLV

Q6NLF4 GPI-anchored protein LLG21.7e-2650Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP--LMPTSSNPNSAPLLKC
        C   F   NYTIITS+CKGP Y   +CCSA  +FACP+ + LND    CA TMFSYINLYG+YPPG+F+N C+EG  GL C       S+  +S P    
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP--LMPTSSNPNSAPLLKC

Query:  PSSAMILASGLVLLLSWL
         +S  +L++ LVL L +L
Subjt:  PSSAMILASGLVLLLSWL

Q9FKT1 GPI-anchored protein LLG14.8e-3467.35Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP----LMP-TSSNPNSA
        CPV+FEF+NYTIITSKCKGP Y PK CC A  +FACPY D LND+++ CA TMFSYINLYGKYPPGLF+N+C+EG  GL CP    L P TS+  N+A
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP----LMP-TSSNPNSA

Q9M0I0 GPI-anchored protein LLG32.1e-2960.61Show/hide
Query:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLAC-PLMPTSSNPNSAPLL
        A C   F   NYTIITSKCKGP Y  K+CCSA  +FACP+ + LND  T CA TMFSYINLYG+YPPG+F+N C+EG  GL C  + PTSS+  S PL+
Subjt:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLAC-PLMPTSSNPNSAPLL

Arabidopsis top hitse value%identityAlignment
AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 21.2e-2750Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP--LMPTSSNPNSAPLLKC
        C   F   NYTIITS+CKGP Y   +CCSA  +FACP+ + LND    CA TMFSYINLYG+YPPG+F+N C+EG  GL C       S+  +S P    
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP--LMPTSSNPNSAPLLKC

Query:  PSSAMILASGLVLLLSWL
         +S  +L++ LVL L +L
Subjt:  PSSAMILASGLVLLLSWL

AT4G26466.1 lorelei3.6e-2950Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPT-SSNPNSAPLLKCP
        C V+FE+++Y ++T +CKGP +  K CCSA  EFACPYV  +NDM + CA TMFSY+N+YG YP GLF+NECRE   GL CPL P  S N N++     P
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPT-SSNPNSAPLLKCP

Query:  SSAMILASGLVLLLSWLV
            +L S    + + LV
Subjt:  SSAMILASGLVLLLSWLV

AT4G28280.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 31.5e-3061.22Show/hide
Query:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLAC-PLMPTSSNPNSAPLL
        AC   F   NYTIITSKCKGP Y  K+CCSA  +FACP+ + LND  T CA TMFSYINLYG+YPPG+F+N C+EG  GL C  + PTSS+  S PL+
Subjt:  ACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLAC-PLMPTSSNPNSAPLL

AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 31.5e-3060.61Show/hide
Query:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLAC-PLMPTSSNPNSAPLL
        A C   F   NYTIITSKCKGP Y  K+CCSA  +FACP+ + LND  T CA TMFSYINLYG+YPPG+F+N C+EG  GL C  + PTSS+  S PL+
Subjt:  AACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLAC-PLMPTSSNPNSAPLL

AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 13.4e-3567.35Show/hide
Query:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP----LMP-TSSNPNSA
        CPV+FEF+NYTIITSKCKGP Y PK CC A  +FACPY D LND+++ CA TMFSYINLYGKYPPGLF+N+C+EG  GL CP    L P TS+  N+A
Subjt:  CPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACP----LMP-TSSNPNSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTTGTGCAGCTTGCCCTGTAAGCTTTGAATTCTTGAACTACACAATCATCACAAGCAAATGTAAAGGGCCTCTATATTCTCCAAAGCTTTGTTGTTCAGCTCTGACCGA
ATTCGCTTGCCCTTACGTCGATGCCTTGAACGATATGACAACTAGTTGCGCTCTGACCATGTTTAGCTACATTAACCTCTATGGAAAATACCCACCTGGCCTTTTCTCGA
ATGAGTGTCGAGAAGGAGATCGCGGTCTTGCTTGCCCTCTAATGCCAACTTCGTCCAACCCGAACTCGGCTCCGCTCTTGAAATGTCCGTCTTCTGCAATGATCCTCGCC
TCCGGCCTTGTACTTCTGCTGTCATGGCTCGTA
mRNA sequenceShow/hide mRNA sequence
AGTTGTGCAGCTTGCCCTGTAAGCTTTGAATTCTTGAACTACACAATCATCACAAGCAAATGTAAAGGGCCTCTATATTCTCCAAAGCTTTGTTGTTCAGCTCTGACCGA
ATTCGCTTGCCCTTACGTCGATGCCTTGAACGATATGACAACTAGTTGCGCTCTGACCATGTTTAGCTACATTAACCTCTATGGAAAATACCCACCTGGCCTTTTCTCGA
ATGAGTGTCGAGAAGGAGATCGCGGTCTTGCTTGCCCTCTAATGCCAACTTCGTCCAACCCGAACTCGGCTCCGCTCTTGAAATGTCCGTCTTCTGCAATGATCCTCGCC
TCCGGCCTTGTACTTCTGCTGTCATGGCTCGTA
Protein sequenceShow/hide protein sequence
SCAACPVSFEFLNYTIITSKCKGPLYSPKLCCSALTEFACPYVDALNDMTTSCALTMFSYINLYGKYPPGLFSNECREGDRGLACPLMPTSSNPNSAPLLKCPSSAMILA
SGLVLLLSWLV