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MS020957 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020957
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold290:154315..154656
RNA-Seq ExpressionMS020957
SyntenyMS020957
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052904.1 hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa]4.0e-1962.5Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT
        M+PI+YERI      R  +S RGFRL SRR SVS+L++KF  LLRILN WRRS   IKKR RS    +       RLRSFRRSNSFYAEA+ADCLDFIKT
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT

Query:  NTSS
        ++SS
Subjt:  NTSS

KAE8637405.1 hypothetical protein CSA_023382 [Cucumis sativus]1.1e-1860Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT
        M+PI+YERI    + R+ +S RGFRL SRR SVS+LR+KF  LLRILN+WRRS   IKK   S    +       +LRSFRRSNSFYAEA+ADCLDFIKT
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT

Query:  NTSSS
         +S S
Subjt:  NTSSS

KAG6596289.1 hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]6.5e-2260Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSI-------KKRR--RSKAEV---AEFPWCTD----RLRSFRRSNSFY
        MEPI+Y+RI  +  G      RGF L+SRRFSVS+LRAKF  LLRILN+WRRS        K RR  RSKA     AEFP C D    RLRSFRRSNSFY
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSI-------KKRR--RSKAEV---AEFPWCTD----RLRSFRRSNSFY

Query:  AEAMADCLDFIKTNTSSSLSVAVDQPMVEF
        AEA+ADCLDFIK ++ SS   A  QP VEF
Subjt:  AEAMADCLDFIKTNTSSSLSVAVDQPMVEF

KAG7027838.1 hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-2260Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSI-------KKRR--RSKAEV---AEFPWCTD----RLRSFRRSNSFY
        MEPI+Y+RI  +  G      RGF L+SRRFSVS+LRAKF  LLRILN+WRRS        K RR  RSKA     AEFP C D    RLRSFRRSNSFY
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSI-------KKRR--RSKAEV---AEFPWCTD----RLRSFRRSNSFY

Query:  AEAMADCLDFIKTNTSSSLSVAVDQPMVEF
        AEA+ADCLDFIK ++ SS   A  QP VEF
Subjt:  AEAMADCLDFIKTNTSSSLSVAVDQPMVEF

XP_022158286.1 uncharacterized protein LOC111024807 [Momordica charantia]7.1e-5398.25Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTS
        MEPISYERIIGKGS RRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKK RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTS
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTS

Query:  SSLSVAVDQPMVEF
        SSLSVAVDQPMVEF
Subjt:  SSLSVAVDQPMVEF

TrEMBL top hitse value%identityAlignment
A0A068TZQ2 Uncharacterized protein1.0e-1242.42Show/hide
Query:  MEPISYERIIGKGSGRRSQSA-----RGFRLNSRRFSVSRLRAKFMCLLRILNKWR-------RSIKKR--------------RRSKAEVAEFPWC----
        M  + Y R+  K S   S S+     RGFR+N RRFSV RLR KF+ LL++ NKWR       RS++K               R+S   + E P+     
Subjt:  MEPISYERIIGKGSGRRSQSA-----RGFRLNSRRFSVSRLRAKFMCLLRILNKWR-------RSIKKR--------------RRSKAEVAEFPWC----

Query:  -TDRLRSFRRSNSFYAEAMADCLDFIKTNTSS
         + RLRS+ R+NSFY+EA+ADCLDFIK N+ S
Subjt:  -TDRLRSFRRSNSFYAEAMADCLDFIKTNTSS

A0A0A0L3I7 Uncharacterized protein5.6e-1960Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT
        M+PI+YERI    + R+ +S RGFRL SRR SVS+LR+KF  LLRILN+WRRS   IKK   S    +       +LRSFRRSNSFYAEA+ADCLDFIKT
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT

Query:  NTSSS
         +S S
Subjt:  NTSSS

A0A1Q3CYT7 Uncharacterized protein1.9e-1141.67Show/hide
Query:  MEPISYERIIGKGSGRRS-QSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS-----------------------IKKRRRSKAEVAEFPWCT-----
        M  +SY R+     GRR+    +GFRLNSRRFSV RLRA+F+ L R+L  WR S                       I  R R    V + P        
Subjt:  MEPISYERIIGKGSGRRS-QSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS-----------------------IKKRRRSKAEVAEFPWCT-----

Query:  -DRLRSFRRSNSFYAEAMADCLDFIKTNTSSS
         DRLRSF RSNSFY++A+ADCL+FIK ++ S+
Subjt:  -DRLRSFRRSNSFYAEAMADCLDFIKTNTSSS

A0A5A7UC85 Uncharacterized protein1.9e-1962.5Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT
        M+PI+YERI      R  +S RGFRL SRR SVS+L++KF  LLRILN WRRS   IKKR RS    +       RLRSFRRSNSFYAEA+ADCLDFIKT
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKT

Query:  NTSS
        ++SS
Subjt:  NTSS

A0A6J1E0I4 uncharacterized protein LOC1110248073.5e-5398.25Show/hide
Query:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTS
        MEPISYERIIGKGS RRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKK RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTS
Subjt:  MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTS

Query:  SSLSVAVDQPMVEF
        SSLSVAVDQPMVEF
Subjt:  SSLSVAVDQPMVEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTATTTCGTATGAGAGGATTATTGGTAAAGGAAGCGGAAGGCGTTCCCAATCGGCGCGGGGCTTCCGCCTCAACTCCAGAAGATTCTCCGTCTCCAGGCTCCG
GGCGAAGTTTATGTGCCTGCTGAGGATCTTAAACAAATGGCGCCGATCGATTAAGAAGAGGAGGAGATCAAAGGCGGAAGTGGCGGAGTTTCCGTGGTGCACCGATCGCC
TGAGATCGTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATGGCGGATTGCTTGGATTTCATCAAGACCAACACCTCATCATCCCTCTCCGTCGCCGTTGATCAACCC
ATGGTTGAATTC
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTATTTCGTATGAGAGGATTATTGGTAAAGGAAGCGGAAGGCGTTCCCAATCGGCGCGGGGCTTCCGCCTCAACTCCAGAAGATTCTCCGTCTCCAGGCTCCG
GGCGAAGTTTATGTGCCTGCTGAGGATCTTAAACAAATGGCGCCGATCGATTAAGAAGAGGAGGAGATCAAAGGCGGAAGTGGCGGAGTTTCCGTGGTGCACCGATCGCC
TGAGATCGTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATGGCGGATTGCTTGGATTTCATCAAGACCAACACCTCATCATCCCTCTCCGTCGCCGTTGATCAACCC
ATGGTTGAATTC
Protein sequenceShow/hide protein sequence
MEPISYERIIGKGSGRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKRRRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSSLSVAVDQP
MVEF