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MS020967 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020967
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA mismatch repair protein MLH3 isoform X2
Genome locationscaffold290:261125..261283
RNA-Seq ExpressionMS020967
SyntenyMS020967
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0032300 - mismatch repair complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0030983 - mismatched DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158269.1 DNA mismatch repair protein MLH3 isoform X1 [Momordica charantia]1.2e-1386.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
XP_022158270.1 DNA mismatch repair protein MLH3 isoform X2 [Momordica charantia]1.2e-1386.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
XP_022158271.1 DNA mismatch repair protein MLH3 isoform X3 [Momordica charantia]1.2e-1386.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
XP_022158272.1 DNA mismatch repair protein MLH3 isoform X4 [Momordica charantia]1.2e-1386.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
XP_022158273.1 DNA mismatch repair protein MLH3 isoform X5 [Momordica charantia]1.2e-1386.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
TrEMBL top hitse value%identityAlignment
A0A6J1DVD7 DNA mismatch repair protein MLH3 isoform X25.6e-1486.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
A0A6J1DVM2 DNA mismatch repair protein MLH3 isoform X55.6e-1486.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
A0A6J1DWT6 DNA mismatch repair protein MLH3 isoform X45.6e-1486.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
A0A6J1DYW9 DNA mismatch repair protein MLH3 isoform X15.6e-1486.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
A0A6J1E0G9 DNA mismatch repair protein MLH3 isoform X35.6e-1486.79Show/hide
Query:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        +L+ SSGFL LASNSLV NSI+KNFLEDAKVLLQLD KFIPVVSGGTLAVIDQ
Subjt:  MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
SwissProt top hitse value%identityAlignment
F4JN26 DNA mismatch repair protein MLH34.4e-0857.41Show/hide
Query:  MLNTSSGFLFLASN-SLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        + + SSG L L S+ SLV  SIN++ LEDAKVL Q+DKK+IP+V+ GT+A++DQ
Subjt:  MLNTSSGFLFLASN-SLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
Arabidopsis top hitse value%identityAlignment
AT4G35520.1 MUTL protein homolog 33.1e-0957.41Show/hide
Query:  MLNTSSGFLFLASN-SLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ
        + + SSG L L S+ SLV  SIN++ LEDAKVL Q+DKK+IP+V+ GT+A++DQ
Subjt:  MLNTSSGFLFLASN-SLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAATACCTCTTCAGGGTTCCTATTTCTTGCCAGCAATTCCTTAGTTATCAATTCCATCAATAAGAACTTCCTTGAAGATGCCAAGGTTCTTCTACAACTGGATAA
GAAGTTCATTCCAGTTGTTTCTGGTGGCACGCTGGCTGTTATTGATCAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCAATACCTCTTCAGGGTTCCTATTTCTTGCCAGCAATTCCTTAGTTATCAATTCCATCAATAAGAACTTCCTTGAAGATGCCAAGGTTCTTCTACAACTGGATAA
GAAGTTCATTCCAGTTGTTTCTGGTGGCACGCTGGCTGTTATTGATCAG
Protein sequenceShow/hide protein sequence
MLNTSSGFLFLASNSLVINSINKNFLEDAKVLLQLDKKFIPVVSGGTLAVIDQ