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MS020970 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020970
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome C biogenesis 452
Genome locationscaffold290:281003..281116
RNA-Seq ExpressionMS020970
SyntenyMS020970
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044955 - Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDY17587.1 BnaC01g27110D [Brassica napus]2.8e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
KAA0051165.1 cytochrome c biogenesis FC [Cucumis melo var. makuwa]2.8e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE ++QMVQLNNFFFFITFMVVPCG TAPIL +WFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
NP_001118286.2 LOW protein: cytochrome C biogenesis ccmF-like protein [Arabidopsis thaliana]2.8e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
TXG46244.1 hypothetical protein EZV62_028275 [Acer yangbiense]1.4e-0884.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFITFMVVP GT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
VDD65183.1 unnamed protein product [Brassica oleracea]2.8e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
TrEMBL top hitse value%identityAlignment
A0A078FXW6 BnaC01g27110D protein1.3e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
A0A3P6DAR1 Uncharacterized protein1.3e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
A0A3P6G2Y0 Uncharacterized protein1.3e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
A0A5A7UBZ9 Cytochrome c biogenesis FC (Mitochondrion)1.3e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE ++QMVQLNNFFFFITFMVVPCG TAPIL +WFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
A0A654GFS6 Uncharacterized protein1.3e-0984.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
SwissProt top hitse value%identityAlignment
P38452 Uncharacterized mitochondrial protein ymf34.3e-0570Show/hide
Query:  MVQLNNFFFFITFMVVPCGTTAPILLKWFV
        MVQL NFFFF+ F+VV CGT APIL +W V
Subjt:  MVQLNNFFFFITFMVVPCGTTAPILLKWFV
P93286 Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein2.7e-0783.33Show/hide
Query:  MVQLNNFFFFITFMVVPCGTTAPILLKWFV
        MVQL+NFFFFI FMVV CGT AP+LLKWFV
Subjt:  MVQLNNFFFFITFMVVPCGTTAPILLKWFV
Arabidopsis top hitse value%identityAlignment
AT2G07815.1 BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1)2.6e-1384.21Show/hide
Query:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
        AKLE +EQMVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV
ATMG00180.1 cytochrome C biogenesis 4521.3e-0986.67Show/hide
Query:  MVQLNNFFFFITFMVVPCGTTAPILLKWFV
        MVQL+NFFFFI FMVVPCGT AP+LLKWFV
Subjt:  MVQLNNFFFFITFMVVPCGTTAPILLKWFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGAAACTCGAACATCTCGAGCAGATGGTCCAACTAAATAACTTTTTCTTTTTCATTACTTTCATGGTCGTGCCTTGTGGCACAACAGCACCCATACTATTGAAATGGTT
TGTT
mRNA sequenceShow/hide mRNA sequence
GCGAAACTCGAACATCTCGAGCAGATGGTCCAACTAAATAACTTTTTCTTTTTCATTACTTTCATGGTCGTGCCTTGTGGCACAACAGCACCCATACTATTGAAATGGTT
TGTT
Protein sequenceShow/hide protein sequence
AKLEHLEQMVQLNNFFFFITFMVVPCGTTAPILLKWFV