CuGenDBv2

Gene ID	MS020973
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	scaffold290:295071..297366
RNA-Seq Expression	MS020973
Synteny	MS020973
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR028945 - Get1 family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

6.0e-66

84.81

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Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        ME EAEGIVEH SS AAP IF +VI FQFLARWLE  K+ GSN+ VE+ELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYSQVLL SKV+IYI LV WFWRASVATVPHHLVQPFGK LSW+AGGTVNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

XP_022145254.1 uncharacterized protein LOC111014752 [Momordica charantia]

4.0e-78

100

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Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

XP_022923433.1 uncharacterized protein LOC111431128 [Cucurbita moschata]

2.1e-66

84.81

Show/hide

Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYS+VLL SKV +YIAL+ WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

XP_023007643.1 uncharacterized protein LOC111500212 [Cucurbita maxima]

2.3e-65

84.08

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Query:  EAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTS
        EAEAEGIVEHRSS AAP IFL+VI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KTS
Subjt:  EAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTS

Query:  YGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        YGLYS+VLL SKV +YI LV WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKV
Subjt:  YGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

XP_023552250.1 uncharacterized protein LOC111809975 [Cucurbita pepo subsp. pepo]

1.6e-66

85.44

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Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYS+VLL SKV +YIALV WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

1.4e-65

85.81

Show/hide

Query:  EAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYG
        E EGIVEHRSS AAP IF +VI FQFLA+WLE  K+ GSN+ VEMELRKSIKQLLKEAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KTSYG
Subjt:  EAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYG

Query:  LYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        LYSQVLL SKV+I+I LV WFWRASVATVPHHLVQPFGK LSWRAGGTVNDYVKV
Subjt:  LYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

A0A1S3BKE1 uncharacterized protein LOC103490650

2.9e-66

84.81

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Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        ME EAEGIVEH SS AAP IF +VI FQFLARWLE  K+ GSN+ VE+ELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYSQVLL SKV+IYI LV WFWRASVATVPHHLVQPFGK LSW+AGGTVNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

A0A6J1CUP1 uncharacterized protein LOC111014752

1.9e-78

100

Show/hide

Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

A0A6J1E9M6 uncharacterized protein LOC111431128

9.9e-67

84.81

Show/hide

Query:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT
        MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKT

Query:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        SYGLYS+VLL SKV +YIAL+ WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKV
Subjt:  SYGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

A0A6J1L884 uncharacterized protein LOC111500212

1.1e-65

84.08

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Query:  EAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTS
        EAEAEGIVEHRSS AAP IFL+VI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KTS
Subjt:  EAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTS

Query:  YGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        YGLYS+VLL SKV +YI LV WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKV
Subjt:  YGLYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

6.2e-42

58.71

Show/hide

Query:  EAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYG
        E E ++E R   AAP  F+VV+ FQ L++WL++ K+ GS N  E ELR  IKQLL+EASALSQP+TFAQAAKLRR AA KEKELA Y E   KE+K SY 
Subjt:  EAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYG

Query:  LYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        +Y + LL SKVVIY+ LVL FWR  +A +   LVQPFG LLSW  GG +  +V V
Subjt:  LYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

4.4e-43

58.71

Show/hide

Query:  EAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYG
        E E ++E R   AAP  F+VV+ FQ L++WL++ K+ GS N  E ELR  IKQLL+EASALSQP+TFAQAAKLRR AA KEKELA Y E   KE+K SY 
Subjt:  EAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYG

Query:  LYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV
        +Y + LL SKVVIY+ LVL FWR  +A +   LVQPFG LLSW  GG +  +V V
Subjt:  LYSQVLLTSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCGTTTGCGGCTCCGTCCATATTTTTGGTTGTTATTACCTTTCAGTTTCTCGCTAGATGGCTCGAACGCAC
GAAGAGGAGCGGTTCCAACAACGATGTGGAAATGGAGTTGCGCAAATCTATAAAGCAACTTCTGAAGGAGGCAAGCGCCTTATCTCAACCATCTACATTTGCACAAGCTG
CAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAACTGGCAAATTATCAAGAATCACGTAGTAAGGAGATGAAGACGTCATATGGTTTATATAGTCAAGTACTACTG
ACGTCAAAGGTTGTGATCTATATTGCTCTGGTTCTCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTTCAGCCGTTTGGAAAACTTTTGTCTTGGAG
GGCTGGAGGTACCGTAAATGATTATGTGAAGGTA

mRNA sequence

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Protein sequence

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MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKEASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYGLYSQVLL
TSKVVIYIALVLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKV

MS020973 (gene) of Bitter gourd (TR) v1 genome