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MS021000 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021000
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold290:449774..450133
RNA-Seq ExpressionMS021000
SyntenyMS021000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5462937.1 hypothetical protein F2P56_018900 [Juglans regia]1.2e-2965.25Show/hide
Query:  LDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMT
        LDLE +P SSG +LAR+ VELT  V +RR VVV+VA + AAAIA DLG LPLD PVI+GLEE S+LVLLLEPE G VD R+GK  LVSGLEVE+R EEM 
Subjt:  LDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMT

Query:  GTQIQISSALCTAVDGSH
          ++++  AL  AVDGSH
Subjt:  GTQIQISSALCTAVDGSH

KAG4988045.1 hypothetical protein JHK85_031028 [Glycine max]3.4e-2157.28Show/hide
Query:  RSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD
        R+ V+LT T+GKR  +V++VA E    +ALDLG LPLDSPV++G EE ++LVLLLE ELGGV   +G  ALV+G EVE+ R  M+G +IQ+ SAL TAV 
Subjt:  RSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD

Query:  GSH
        G H
Subjt:  GSH

KAG4993660.1 hypothetical protein JHK86_030487 [Glycine max]9.0e-2257.69Show/hide
Query:  ARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAV
        AR+ V+LT T+GKR  +V++VA E    +ALDLG LPLDSPV++G EE ++LVLLLE ELGGV   +G  ALV+G EVE+ R  M+G +IQ+ SAL TAV
Subjt:  ARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAV

Query:  DGSH
         G H
Subjt:  DGSH

KAG5123654.1 hypothetical protein JHK82_030391 [Glycine max]9.0e-2258.25Show/hide
Query:  RSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD
        R+ V+LT T+GKR  +V++VA E    +ALDLG LPLDSPV++G EE ++LVLLLE ELGGV   +G  ALV+G EVE+ R  M+G QIQ+ SAL TAV 
Subjt:  RSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD

Query:  GSH
        G H
Subjt:  GSH

KHN41865.1 L-ascorbate peroxidase 3, peroxisomal [Glycine soja]1.2e-2157.69Show/hide
Query:  ARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAV
        AR+ V+LT T+GKR  +V++VA E    +ALDLG LPLDSPV++G EE ++LVLLLE ELGGV   +G  ALV+G EVE+ R  M+G +IQ+ SAL TAV
Subjt:  ARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAV

Query:  DGSH
         G H
Subjt:  DGSH

TrEMBL top hitse value%identityAlignment
A0A498HVY7 Uncharacterized protein1.2e-1159.72Show/hide
Query:  ALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD
        ALDL   PLD PV+  LEE S+LVLL+EPELG VDRRK   +LVSGLE E+RR E+   ++Q+ SAL   VD
Subjt:  ALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD

A0A6A2WCL8 Uncharacterized protein1.2e-1651.55Show/hide
Query:  LDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRRE
        L LE++P+ SG++LA  ++ LT T+ +RR +++N+ ++  A I LDLG++P+ SPVI GLEE  ELVL LE E+G +D  + K ALVS LEVEI RE
Subjt:  LDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRRE

A5CB28 Uncharacterized protein2.2e-2159.79Show/hide
Query:  VELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD
        +ELT TVG+RR ++V+VA E A AIALDLG LPLDSPVI+GLE+  +LVL LE EL GVD  +G+ A V+G+EVE+R EE+ G ++++ SA  TAVD
Subjt:  VELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCCTTGATCTTGAATCTGTACCTAGGAGCTCTGGGAATAACCTGGCTAGGTCCGAAGTGGAACTGACCTGGACTGTCGGTAAGAGGAGGCCCGTCGTCGTAAACGTAGC
CTACGAGATGGCCGCAGCCATTGCACTTGATCTTGGTGCGCTTCCGCTGGATTCCCCAGTAATTGAGGGTCTCGAAGAATGGTCTGAGCTTGTCCTCCTTCTCGAGCCTG
AACTTGGTGGAGTCGATCGACGAAAAGGAAAGAGTGCCCTTGTTTCCGGCCTCGAAGTAGAAATCCGGCGGGAAGAGATGACCGGAACTCAGATTCAGATCAGCTCCGCA
TTGTGTACAGCAGTAGATGGAAGCCATTGT
mRNA sequenceShow/hide mRNA sequence
AGCCTTGATCTTGAATCTGTACCTAGGAGCTCTGGGAATAACCTGGCTAGGTCCGAAGTGGAACTGACCTGGACTGTCGGTAAGAGGAGGCCCGTCGTCGTAAACGTAGC
CTACGAGATGGCCGCAGCCATTGCACTTGATCTTGGTGCGCTTCCGCTGGATTCCCCAGTAATTGAGGGTCTCGAAGAATGGTCTGAGCTTGTCCTCCTTCTCGAGCCTG
AACTTGGTGGAGTCGATCGACGAAAAGGAAAGAGTGCCCTTGTTTCCGGCCTCGAAGTAGAAATCCGGCGGGAAGAGATGACCGGAACTCAGATTCAGATCAGCTCCGCA
TTGTGTACAGCAGTAGATGGAAGCCATTGT
Protein sequenceShow/hide protein sequence
SLDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAAIALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSA
LCTAVDGSHC