CuGenDBv2

Gene ID	MS021011
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold290:518777..518914
RNA-Seq Expression	MS021011
Synteny	MS021011
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAB2011052.1 hypothetical protein ES319_D10G288400v1, partial [Gossypium barbadense]

6.3e-08

77.78

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKV  V QPR L+IVQRRVVGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

KJB74368.1 hypothetical protein B456_011G290700 [Gossypium raimondii]

1.4e-07

77.78

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA V QPR L+IVQ RVVGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

PHU30037.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum chinense]

3.1e-07

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+I+Q R VGVTHY+LGRIA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

PNT47706.1 hypothetical protein POPTR_002G040000 [Populus trichocarpa]

1.8e-07

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVAL  QPR L+I+Q RVVGVTHY+LG IA TW FFL +IIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

TYG52000.1 hypothetical protein ES288_D10G307000v1 [Gossypium darwinii]

6.3e-08

77.78

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKV  V QPR L+IVQRRVVGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

TrEMBL top hits

e value

%identity

Alignment

A0A0D2TF51 Uncharacterized protein

6.8e-08

77.78

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA V QPR L+IVQ RVVGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

A0A2G3DGC7 Photosystem I chlorophyll a apoprotein A1

1.5e-07

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+I+Q R VGVTHY+LGRIA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

A0A2K2BD50 Uncharacterized protein

8.9e-08

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVAL  QPR L+I+Q RVVGVTHY+LG IA TW FFL +IIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

A0A5D2B626 Uncharacterized protein

3.0e-08

77.78

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKV  V QPR L+IVQRRVVGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

A0A5J5PWQ4 Uncharacterized protein (Fragment)

3.0e-08

77.78

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKV  V QPR L+IVQRRVVGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

SwissProt top hits

e value

%identity

Alignment

A4QJB5 Photosystem I P700 chlorophyll a apoprotein A1

1.6e-09

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+IVQ R VGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A1

1.6e-09

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+IVQ R VGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

Q09G46 Photosystem I P700 chlorophyll a apoprotein A1

9.1e-10

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+IVQ R VGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

Q3V534 Photosystem I P700 chlorophyll a apoprotein A1

1.6e-09

73.33

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+IVQ R VGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

Q9MUJ3 Photosystem I P700 chlorophyll a apoprotein A1

9.1e-10

71.11

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA V QPR L+I+Q R VGVTHY+LG IA TW FFL RI+AV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.4e-10

71.11

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Query:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV
        KLKVA   QPR L+I+Q R VGVTHY+LG IA TW FFL RIIAV
Subjt:  KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAV

Sequences

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CDS sequence

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AAATTAAAAGTTGCTCTAGTTTTTCAGCCGAGAATCTTGAATATTGTCCAAAGACGTGTTGTAGGAGTAACCCACTACATTCTAGGTAGAATTGCCATAACATGGACGTT
CTTTTTACCAAGAATTATTGCAGTCGAT

mRNA sequence

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AAATTAAAAGTTGCTCTAGTTTTTCAGCCGAGAATCTTGAATATTGTCCAAAGACGTGTTGTAGGAGTAACCCACTACATTCTAGGTAGAATTGCCATAACATGGACGTT
CTTTTTACCAAGAATTATTGCAGTCGAT

Protein sequence

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KLKVALVFQPRILNIVQRRVVGVTHYILGRIAITWTFFLPRIIAVD

MS021011 (gene) of Bitter gourd (TR) v1 genome