; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021012 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021012
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-related modifier 1 homolog
Genome locationscaffold290:524048..524798
RNA-Seq ExpressionMS021012
SyntenyMS021012
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040023.1 ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa]1.5e-4994.17Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        MDMT+ L FKCSGGLELLCNSVKIHNVSIDPENG GKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

KAG7026033.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-4991.26Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        +DMT++L FKCSGGLELLC+SVKIHNVSI+PENGAGKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

XP_022145475.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia]6.4e-53100Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

XP_022145476.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Momordica charantia]2.6e-4694.85Show/hide
Query:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
Subjt:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

XP_038876424.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida]3.0e-5094.17Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        MDMT++L FKCSGGLELLC+SVKIHNVSIDPENG GKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

TrEMBL top hitse value%identityAlignment
A0A0A0KCT7 Ubiquitin-related modifier 1 homolog7.2e-5093.2Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        MDMT++L FKCSGGLELLCNSVKIHNVSIDPENG GK IMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A1S3CCC7 Ubiquitin-related modifier 1 homolog1.2e-4491.75Show/hide
Query:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELLCNSVKIHNVSIDPENG GKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Subjt:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

A0A5D3DLM7 Ubiquitin-related modifier 1 homolog7.2e-5094.17Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        MDMT+ L FKCSGGLELLCNSVKIHNVSIDPENG GKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A6J1CUK8 Ubiquitin-related modifier 1 homolog3.1e-53100Show/hide
Query:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
        MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL
Subjt:  MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A6J1CWE9 Ubiquitin-related modifier 1 homolog1.3e-4694.85Show/hide
Query:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
Subjt:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 11.6e-3877.78Show/hide
Query:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELLC+S KIH V++D  NGA      MK LLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Subjt:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

B3H7G2 Ubiquitin-related modifier 1 homolog 21.1e-3984.62Show/hide
Query:  GGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        GGLELLC+SVKIH V+I+  N +  L MKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LE+KDV+VFISTLHGG
Subjt:  GGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

B6SXH2 Ubiquitin-related modifier 1 homolog2.0e-3369.7Show/hide
Query:  LAFKCSGGLELLC-NSVKIHNVSI-DPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELL  NS K+H V +  P++G GK+ MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LAFKCSGGLELLC-NSVKIHNVSI-DPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

Q0D6M1 Ubiquitin-related modifier 1 homolog3.7e-3569.39Show/hide
Query:  LAFKCSGGLELLC-NSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELL   S K+H V + P +G GK++MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LAFKCSGGLELLC-NSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

Q7GBC8 Ubiquitin-related modifier 1 homolog3.7e-3569.39Show/hide
Query:  LAFKCSGGLELLC-NSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELL   S K+H V + P +G GK++MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LAFKCSGGLELLC-NSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 11.1e-3977.78Show/hide
Query:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        L  +  GGLELLC+S KIH V++D  NGA      MK LLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Subjt:  LAFKCSGGLELLCNSVKIHNVSIDPENGAGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG

AT3G61113.1 Ubiquitin related modifier 17.9e-4184.62Show/hide
Query:  GGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG
        GGLELLC+SVKIH V+I+  N +  L MKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LE+KDV+VFISTLHGG
Subjt:  GGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGACAATAGTATTAGCCTTTAAATGCAGTGGGGGATTGGAGCTCCTATGCAACTCTGTGAAGATTCATAATGTCAGTATCGATCCTGAAAATGGAGCAGGAAA
ATTAATCATGAAAGATTTGCTCTCTTGGGTTCGTACTAATCTGATCAAGGAGCGACCGGAAATGTTTATGAAAGGCGACACTGTGAGACCTGGTGTTCTGGTGCTTGTAA
ATGATTGTGATTGGGAACTTAGTGGGCAGCTTGACACACCATTGGAAGAGAAGGACGTGGTAGTGTTCATATCCACATTGCATGGAGGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGACAATAGTATTAGCCTTTAAATGCAGTGGGGGATTGGAGCTCCTATGCAACTCTGTGAAGATTCATAATGTCAGTATCGATCCTGAAAATGGAGCAGGAAA
ATTAATCATGAAAGATTTGCTCTCTTGGGTTCGTACTAATCTGATCAAGGAGCGACCGGAAATGTTTATGAAAGGCGACACTGTGAGACCTGGTGTTCTGGTGCTTGTAA
ATGATTGTGATTGGGAACTTAGTGGGCAGCTTGACACACCATTGGAAGAGAAGGACGTGGTAGTGTTCATATCCACATTGCATGGAGGA
Protein sequenceShow/hide protein sequence
MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG