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MS021020 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021020
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationscaffold290:593174..593611
RNA-Seq ExpressionMS021020
SyntenyMS021020
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145264.1 uncharacterized protein LOC111014759 isoform X1 [Momordica charantia]3.3e-2651.03Show/hide
Query:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI
        WTS +AK LV LI EQ+Q+GRKELEW  IC+EFC ++K+ W+ EQLK+QYAVMRKQYLIVKSIF RDDFSW  STG+IV T                   
Subjt:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI

Query:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG
        +     R    E LY                TYE+LC IFSNSDG
Subjt:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG

XP_022145265.1 uncharacterized protein LOC111014759 isoform X2 [Momordica charantia]3.3e-2651.03Show/hide
Query:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI
        WTS +AK LV LI EQ+Q+GRKELEW  IC+EFC ++K+ W+ EQLK+QYAVMRKQYLIVKSIF RDDFSW  STG+IV T                   
Subjt:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI

Query:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG
        +     R    E LY                TYE+LC IFSNSDG
Subjt:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG

XP_035549340.1 L10-interacting MYB domain-containing protein-like isoform X1 [Juglans regia]3.6e-1740.14Show/hide
Query:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF
        WTS L K L +L+ + +QKG +      +  WR IC+EF +KT + W+ EQLKN+YAV+R+QY+ VKS+  + DFSW  S G I+  DE+   Y+R    
Subjt:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF

Query:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS
                        +ETL Y G           CP Y+ELCIIFS
Subjt:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS

XP_035549341.1 L10-interacting MYB domain-containing protein-like isoform X2 [Juglans regia]3.6e-1740.14Show/hide
Query:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF
        WTS L K L +L+ + +QKG +      +  WR IC+EF +KT + W+ EQLKN+YAV+R+QY+ VKS+  + DFSW  S G I+  DE+   Y+R    
Subjt:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF

Query:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS
                        +ETL Y G           CP Y+ELCIIFS
Subjt:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS

XP_035549342.1 L10-interacting MYB domain-containing protein-like isoform X3 [Juglans regia]3.6e-1740.14Show/hide
Query:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF
        WTS L K L +L+ + +QKG +      +  WR IC+EF +KT + W+ EQLKN+YAV+R+QY+ VKS+  + DFSW  S G I+  DE+   Y+R    
Subjt:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF

Query:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS
                        +ETL Y G           CP Y+ELCIIFS
Subjt:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS

TrEMBL top hitse value%identityAlignment
A0A2N9J0Q6 Myb_DNA-bind_3 domain-containing protein1.8e-1738.93Show/hide
Query:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF
        WT+ L K L +L+  Q+QKG +      +  WR IC+EF +KT ++W+ EQLKN+YAV+R+QY+ VKS+  + DF+W   TG IV  DE+ A Y      
Subjt:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF

Query:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNS
                  +     +E L Y G           CP Y+ELC+IFS S
Subjt:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNS

A0A6J1CTZ5 uncharacterized protein LOC111014759 isoform X21.6e-2651.03Show/hide
Query:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI
        WTS +AK LV LI EQ+Q+GRKELEW  IC+EFC ++K+ W+ EQLK+QYAVMRKQYLIVKSIF RDDFSW  STG+IV T                   
Subjt:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI

Query:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG
        +     R    E LY                TYE+LC IFSNSDG
Subjt:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG

A0A6J1CUQ3 uncharacterized protein LOC111014759 isoform X11.6e-2651.03Show/hide
Query:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI
        WTS +AK LV LI EQ+Q+GRKELEW  IC+EFC ++K+ W+ EQLK+QYAVMRKQYLIVKSIF RDDFSW  STG+IV T                   
Subjt:  WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHI

Query:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG
        +     R    E LY                TYE+LC IFSNSDG
Subjt:  IVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDG

A0A6P9ELE7 L10-interacting MYB domain-containing protein-like isoform X11.8e-1740.14Show/hide
Query:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF
        WTS L K L +L+ + +QKG +      +  WR IC+EF +KT + W+ EQLKN+YAV+R+QY+ VKS+  + DFSW  S G I+  DE+   Y+R    
Subjt:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF

Query:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS
                        +ETL Y G           CP Y+ELCIIFS
Subjt:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS

A0A6P9F3R0 L10-interacting MYB domain-containing protein-like isoform X31.8e-1740.14Show/hide
Query:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF
        WTS L K L +L+ + +QKG +      +  WR IC+EF +KT + W+ EQLKN+YAV+R+QY+ VKS+  + DFSW  S G I+  DE+   Y+R    
Subjt:  WTSILAKKLVNLISEQLQKGRK------ELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSF

Query:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS
                        +ETL Y G           CP Y+ELCIIFS
Subjt:  ISKTHIIVIAVKRLSLSETLYYCGGLFVKKQRIVICPTYEELCIIFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02210.1 unknown protein2.9e-0422.92Show/hide
Query:  WTSILAKKLVNLISEQLQKGR------KELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVR
        W   + +  ++L+ +Q ++G       ++  W  + N F  K +  ++V+ LKN+Y  +R+Q+  +KSI   D F+W     ++   +     Y++
Subjt:  WTSILAKKLVNLISEQLQKGR------KELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVR

AT4G02210.2 unknown protein2.9e-0422.92Show/hide
Query:  WTSILAKKLVNLISEQLQKGR------KELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVR
        W   + +  ++L+ +Q ++G       ++  W  + N F  K +  ++V+ LKN+Y  +R+Q+  +KSI   D F+W     ++   +     Y++
Subjt:  WTSILAKKLVNLISEQLQKGR------KELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGACATCAATCCTCGCCAAGAAACTTGTGAATTTGATAAGTGAACAACTGCAGAAAGGAAGGAAAGAATTGGAATGGAGGCTTATATGCAATGAGTTCTGCAGGAAAAC
AAAAATGGAATGGAATGTAGAACAACTGAAGAATCAATACGCTGTTATGAGAAAGCAATACTTGATTGTGAAGTCGATATTCTATCGGGACGACTTCTCATGGCGTGGAA
GTACTGGGGTTATTGTGACCACAGATGAGAGTACGGCCACATATGTTAGGGTATGTTCTTTTATCTCTAAAACTCATATTATTGTGATAGCTGTGAAGAGGTTATCTCTT
TCTGAAACTCTTTATTATTGTGGCGGCTTATTTGTCAAAAAGCAGAGAATAGTGATTTGTCCAACATATGAAGAGTTATGCATAATTTTCTCCAATTCTGATGGTAAG
mRNA sequenceShow/hide mRNA sequence
TGGACATCAATCCTCGCCAAGAAACTTGTGAATTTGATAAGTGAACAACTGCAGAAAGGAAGGAAAGAATTGGAATGGAGGCTTATATGCAATGAGTTCTGCAGGAAAAC
AAAAATGGAATGGAATGTAGAACAACTGAAGAATCAATACGCTGTTATGAGAAAGCAATACTTGATTGTGAAGTCGATATTCTATCGGGACGACTTCTCATGGCGTGGAA
GTACTGGGGTTATTGTGACCACAGATGAGAGTACGGCCACATATGTTAGGGTATGTTCTTTTATCTCTAAAACTCATATTATTGTGATAGCTGTGAAGAGGTTATCTCTT
TCTGAAACTCTTTATTATTGTGGCGGCTTATTTGTCAAAAAGCAGAGAATAGTGATTTGTCCAACATATGAAGAGTTATGCATAATTTTCTCCAATTCTGATGGTAAG
Protein sequenceShow/hide protein sequence
WTSILAKKLVNLISEQLQKGRKELEWRLICNEFCRKTKMEWNVEQLKNQYAVMRKQYLIVKSIFYRDDFSWRGSTGVIVTTDESTATYVRVCSFISKTHIIVIAVKRLSL
SETLYYCGGLFVKKQRIVICPTYEELCIIFSNSDGK