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MS021028 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021028
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold290:641201..641596
RNA-Seq ExpressionMS021028
SyntenyMS021028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1438.26Show/hide
Query:  MDSNWTMTKNVGAREMNGTLLLRED--ELKLKENLFKWWSESEVQKVINNVGHGLKITMFDVNASRSKKQSMRRISDEDYAIDWDV--KHYQEGDKILMR
        M  +WTM K +   +MNG L LRED  +  ++ NLF WW  S+V+ +   VG  ++I ++DVN  ++ + +MR +    Y I+WD+  K Y  GD +LM 
Subjt:  MDSNWTMTKNVGAREMNGTLLLRED--ELKLKENLFKWWSESEVQKVINNVGHGLKITMFDVNASRSKKQSMRRISDEDYAIDWDV--KHYQEGDKILMR

Query:  WDLQKKQLCYMVVQS
        WDL+  +L Y ++Q+
Subjt:  WDLQKKQLCYMVVQS

KAG6575832.1 hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1539.84Show/hide
Query:  MDSNWTMTKNVGAREMNGTLLLREDEL--KLKENLFKWWSESEVQKVINNVGHGLKITMFDVNASRSKKQSMRRISDEDYAIDWDVKH--YQEGDKILMR
        M   WTM K +   +MNG L LRED++   +  NLF+WWS S+V+ +   +G+  KIT+FD N +     ++R +    Y I+WDVK+  Y  G  +LM 
Subjt:  MDSNWTMTKNVGAREMNGTLLLREDEL--KLKENLFKWWSESEVQKVINNVGHGLKITMFDVNASRSKKQSMRRISDEDYAIDWDVKH--YQEGDKILMR

Query:  WDLQKKQLCYMVVQSSTLTMHGASSSQS
        WDL+  +L Y V+Q     M  A SS S
Subjt:  WDLQKKQLCYMVVQSSTLTMHGASSSQS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAAAAAAAATGGACAGCAATTGGACAATGACAAAAAATGTGGGAGCAAGAGAGATGAATGGAACATTGTTGTTGAGAGAAGATGAATTGAAGCTCAAAGAGAATTTATT
CAAATGGTGGTCGGAAAGCGAAGTTCAAAAGGTGATAAATAATGTAGGGCATGGACTTAAAATCACTATGTTTGATGTAAATGCATCTCGCTCCAAAAAACAAAGCATGA
GAAGAATTTCTGATGAAGACTACGCTATTGATTGGGATGTCAAACATTATCAAGAAGGAGATAAGATTTTGATGCGTTGGGATCTACAGAAAAAGCAGTTATGTTATATG
GTCGTTCAAAGTAGCACTCTAACAATGCACGGCGCTTCTTCGAGCCAATCTTCTCCATACAAAAAA
mRNA sequenceShow/hide mRNA sequence
ATAAAAAAAATGGACAGCAATTGGACAATGACAAAAAATGTGGGAGCAAGAGAGATGAATGGAACATTGTTGTTGAGAGAAGATGAATTGAAGCTCAAAGAGAATTTATT
CAAATGGTGGTCGGAAAGCGAAGTTCAAAAGGTGATAAATAATGTAGGGCATGGACTTAAAATCACTATGTTTGATGTAAATGCATCTCGCTCCAAAAAACAAAGCATGA
GAAGAATTTCTGATGAAGACTACGCTATTGATTGGGATGTCAAACATTATCAAGAAGGAGATAAGATTTTGATGCGTTGGGATCTACAGAAAAAGCAGTTATGTTATATG
GTCGTTCAAAGTAGCACTCTAACAATGCACGGCGCTTCTTCGAGCCAATCTTCTCCATACAAAAAA
Protein sequenceShow/hide protein sequence
IKKMDSNWTMTKNVGAREMNGTLLLREDELKLKENLFKWWSESEVQKVINNVGHGLKITMFDVNASRSKKQSMRRISDEDYAIDWDVKHYQEGDKILMRWDLQKKQLCYM
VVQSSTLTMHGASSSQSSPYKK