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MS021041 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021041
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L33, chloroplastic
Genome locationscaffold290:719849..720038
RNA-Seq ExpressionMS021041
SyntenyMS021041
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATI24774.1 ribosomal protein L33 [Plukenetia volubilis]2.0e-0983.72Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        R+ VILECTR VRNSVNKKS  ISRYITQKNRHNTPS+LE IK
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

QJF46404.1 ribosomal protein L33 [Cucumis melo]2.6e-1271.43Show/hide
Query:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        MEE RE KIQG   ++ K  RVTVILECTR VRN VNK+S+ ISRYITQKNRHNTPS+LE  K
Subjt:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

YP_009387665.1 ribosomal protein L33 [Hansenia forbesii]1.6e-0963.49Show/hide
Query:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        MEE  + KIQGG  ++ K  R+TVILECT  VRN VNK S  ISRYIT+KNRHNTP++LE  K
Subjt:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

YP_009751843.1 ribosomal protein L33 [Indofevillea khasiana]2.7e-0983.72Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVTVILECTR VRNSVNK+S+ ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

YP_009764761.1 ribosomal protein L33 [Acrocarpus fraxinifolius]2.0e-0986.05Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVTVILECT  VRNSVNKKS  ISRYITQKNRHNTPS+LEF K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

TrEMBL top hitse value%identityAlignment
A0A1Y0B5C5 50S ribosomal protein L33, chloroplastic7.6e-1063.49Show/hide
Query:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        MEE  + KIQGG  ++ K  R+TVILECT  VRN VNK S  ISRYIT+KNRHNTP++LE  K
Subjt:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

A0A1Y0B5V8 50S ribosomal protein L33, chloroplastic7.6e-1063.49Show/hide
Query:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        MEE  + KIQGG  ++ K  R+TVILECT  VRN VNK S  ISRYIT+KNRHNTP++LE  K
Subjt:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

A0A6H0E0V9 Ribosomal protein L339.9e-1086.05Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVTVILECT  VRNSVNKKS  ISRYITQKNRHNTPS+LEF K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

A0A6M3W1I6 50S ribosomal protein L33, chloroplastic1.3e-1271.43Show/hide
Query:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        MEE RE KIQG   ++ K  RVTVILECTR VRN VNK+S+ ISRYITQKNRHNTPS+LE  K
Subjt:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

A0A7S9EXC0 Ribosomal protein L337.6e-1063.49Show/hide
Query:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        MEE  + KIQGG  ++ K  R+TVILECT  VRN VNK S  ISRYIT+KNRHNTP++LE  K
Subjt:  MEESRELKIQGGSWSRVK-CRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

SwissProt top hitse value%identityAlignment
A0ZZ56 50S ribosomal protein L33, chloroplastic1.5e-1076.74Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVT+ILECT  VRN VNK+S  ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

A6MM57 50S ribosomal protein L33, chloroplastic1.5e-1079.07Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RV VILECT  VRN VNK+SL ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

B1A956 50S ribosomal protein L33, chloroplastic1.5e-1076.74Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVT+ILECT  VRN VNK+S  ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

Q2L929 50S ribosomal protein L33, chloroplastic1.5e-1076.74Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVT+ILECT  VRN VNK+S  ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

Q2QD68 50S ribosomal protein L33, chloroplastic1.0e-1181.4Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVTVILECTR VRN VNK+S+ ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK

Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L331.5e-1069.77Show/hide
Query:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK
        RVT+ILECT  VRN + K++  ISRYITQKNRHNTPS+LE  K
Subjt:  RVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGTCGCGTGAATTAAAAATCCAAGGAGGTTCATGGTCAAGGGTAAAGTGCCGAGTAACAGTTATTTTGGAATGTACTCGTTATGTTCGAAACAGTGTTAATAA
GAAATCATTGAGGATTTCCAGATATATTACTCAAAAGAATAGACACAATACGCCTAGTCAGTTGGAATTTATCAAATTA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGTCGCGTGAATTAAAAATCCAAGGAGGTTCATGGTCAAGGGTAAAGTGCCGAGTAACAGTTATTTTGGAATGTACTCGTTATGTTCGAAACAGTGTTAATAA
GAAATCATTGAGGATTTCCAGATATATTACTCAAAAGAATAGACACAATACGCCTAGTCAGTTGGAATTTATCAAATTA
Protein sequenceShow/hide protein sequence
MEESRELKIQGGSWSRVKCRVTVILECTRYVRNSVNKKSLRISRYITQKNRHNTPSQLEFIKL