; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021058 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021058
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold290:897044..902193
RNA-Seq ExpressionMS021058
SyntenyMS021058
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015794.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.7e-14493.54Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSL L NSH KPSNFYPKLKSSLSFPSA SVLK TA KPSRTLA  CSV MT PQTPD A+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

XP_008448589.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo]4.1e-14593.88Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  PCSV MTAPQTPD +RRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

XP_022145352.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia]3.0e-15699.66Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

XP_022923515.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata]1.6e-14493.54Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSL L NSH KPSNFYPKLKSSLSFPSA SVLK TA KPSRTLA+ CSV MT PQTPD A+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

XP_038876611.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida]8.3e-14694.22Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTL+PHASS+ LP SH KPSNF PKLKS+LSFPSA SVLK TA KPSRT A PCSVLMTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDP KFL PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

TrEMBL top hitse value%identityAlignment
A0A1S3BJF4 ATP-dependent Clp protease proteolytic subunit2.0e-14593.88Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  PCSV MTAPQTPD +RRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1CWB9 ATP-dependent Clp protease proteolytic subunit1.5e-15699.66Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1EC18 ATP-dependent Clp protease proteolytic subunit7.6e-14593.54Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSL L NSH KPSNFYPKLKSSLSFPSA SVLK TA KPSRTLA+ CSV MT PQTPD A+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1FAG6 ATP-dependent Clp protease proteolytic subunit3.0e-14190.82Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTL+PHAS+LSLPNSH K S FYPK KSSLSFPS+ SVLKATALKPSRTLA PCSVLMT PQTPD AR GAETDAMGLLLRERIVFLGN+IDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+ RIIS +TGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKD+IIPLM +PERVKA+LNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1HNH6 ATP-dependent Clp protease proteolytic subunit1.2e-14292.18Show/hide
Query:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIPHASSL L NSH KPSNFYPKLKS LSFPSA SVLK TA KPSRTLA+  SV MT PQTPD A+RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KF +PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

SwissProt top hitse value%identityAlignment
Q3ANI8 ATP-dependent Clp protease proteolytic subunit 11.8e-5555.38Show/hide
Query:  PCSVLMTAPQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIA
        P S     P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INSPGGS++A +AIYD +Q V  DV TI  G+A
Subjt:  PCSVLMTAPQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIA

Query:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID
        AS  + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P DK+ +D DRD ++SP EAVEYGLID V+D
Subjt:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q3B0U1 ATP-dependent Clp protease proteolytic subunit 24.1e-5554.87Show/hide
Query:  PCSVLMTAPQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIA
        P S     P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++NSPGGS++A +AIYD +Q V  DV TI  G+A
Subjt:  PCSVLMTAPQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIA

Query:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID
        AS  + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P DK+ +D DRD ++SP EAVEYGLID V+D
Subjt:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q7UA36 ATP-dependent Clp protease proteolytic subunit 11.3e-5353.85Show/hide
Query:  PCSVLMTAPQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIA
        P S     P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INSPGGS++A +AIYD +Q V  DV TI  G+A
Subjt:  PCSVLMTAPQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIA

Query:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID
        AS  + +L GG KGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  ++++ TG P DK+ +D DRD ++SP EAV+YGLID V+D
Subjt:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q7V992 ATP-dependent Clp protease proteolytic subunit 15.9e-5455.61Show/hide
Query:  PQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INSPGGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDVARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP +AVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic1.2e-10270.43Show/hide
Query:  MELLSRCSTLIP-------HASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVF
        M  LS  S+L P       ++SS +  +S PKP+N Y K    +S P     L+ T+  P R   +  S+ M+  QT + A RGAE+D MGLLLRERIVF
Subjt:  MELLSRCSTLIP-------HASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVF

Query:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG
        LG+SIDDFVADAI+SQLLLLDA+D  KDI+LFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASG
Subjt:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG

Query:  QAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEI
        QAIDVEIQA+E+MHNKNNVT II+  T   F++V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NYEEISKDP KFLTP++PDDEI
Subjt:  QAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEI

Query:  Y
        Y
Subjt:  Y

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 58.0e-4652.1Show/hide
Query:  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH
        L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NSPGGS++A MAI+D ++ +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+H
Subjt:  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH

Query:  QPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVI
        QPLGGA G   D++IQA E++H+K N+   ++  TG   +K+ +D DRD +MS  EA EYGLIDGVI
Subjt:  QPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVI

AT1G11750.1 CLP protease proteolytic subunit 62.9e-4042.02Show/hide
Query:  PQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG
        P  P V   G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N PGGS  + +AIYD +  ++  V T+A G+AAS  +++L 
Subjt:  PQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG

Query:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
        GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  + R+ + FTG P +KVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G11750.2 CLP protease proteolytic subunit 62.9e-4042.02Show/hide
Query:  PQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG
        P  P V   G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N PGGS  + +AIYD +  ++  V T+A G+AAS  +++L 
Subjt:  PQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG

Query:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
        GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  + R+ + FTG P +KVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G66670.1 CLP protease proteolytic subunit 39.7e-5247.58Show/hide
Query:  PKLKSSLSFPSACSVLKATALKPSRTLASPCSV----LMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI
        PK        S+ S+ K     P +TL+S   V    + +  Q+P       E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFI
Subjt:  PKLKSSLSFPSACSVLKATALKPSRTLASPCSV----LMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI

Query:  NSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDK
        NSPGGS++A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M++K  + +I S  TG P  +
Subjt:  NSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDK

Query:  VQKDIDRDRYMSPIEAVEYGLIDGVID
        ++ D DRD +++P EA EYGLID VID
Subjt:  VQKDIDRDRYMSPIEAVEYGLIDGVID

AT5G45390.1 CLP protease P48.4e-10470.43Show/hide
Query:  MELLSRCSTLIP-------HASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVF
        M  LS  S+L P       ++SS +  +S PKP+N Y K    +S P     L+ T+  P R   +  S+ M+  QT + A RGAE+D MGLLLRERIVF
Subjt:  MELLSRCSTLIP-------HASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVF

Query:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG
        LG+SIDDFVADAI+SQLLLLDA+D  KDI+LFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASG
Subjt:  LGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG

Query:  QAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEI
        QAIDVEIQA+E+MHNKNNVT II+  T   F++V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NYEEISKDP KFLTP++PDDEI
Subjt:  QAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEI

Query:  Y
        Y
Subjt:  Y


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTTTCACGATGTTCTACTCTCATTCCTCACGCATCTTCCCTCAGCCTTCCGAATTCTCATCCAAAGCCATCCAATTTCTATCCCAAGCTCAAATCCAGTCT
CTCTTTTCCTTCCGCTTGCTCAGTCCTCAAGGCAACCGCTCTTAAACCCTCGAGAACTCTAGCTTCGCCGTGCTCCGTCCTCATGACGGCTCCACAGACGCCGGATGTCG
CCCGAAGAGGCGCCGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATCGTCTTCTTAGGGAATAGCATCGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTC
TTGCTATTGGATGCTCAGGACTCTACCAAAGATATCAGGCTCTTCATTAATTCCCCCGGCGGCTCTCTCAGTGCTACAATGGCAATCTACGATGTCGTACAGCTCGTGAG
GGCTGATGTCTCCACAATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGCAAGCGTCTCGCAATGCCTAATGCACGTATTATGG
TTCATCAACCTCTTGGAGGGGCGAGTGGTCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACGTAACGAGAATTATCTCCGAATTCACT
GGCCATCCGTTTGATAAAGTCCAAAAAGATATTGATAGGGATCGTTATATGTCGCCGATAGAGGCGGTTGAATATGGATTGATTGATGGAGTTATTGACAAAGATAGCAT
TATACCTCTCATGCCAGTGCCAGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTTTTGACACCAGATGTCCCCGACGACGAGATAT
AC
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTCTTTCACGATGTTCTACTCTCATTCCTCACGCATCTTCCCTCAGCCTTCCGAATTCTCATCCAAAGCCATCCAATTTCTATCCCAAGCTCAAATCCAGTCT
CTCTTTTCCTTCCGCTTGCTCAGTCCTCAAGGCAACCGCTCTTAAACCCTCGAGAACTCTAGCTTCGCCGTGCTCCGTCCTCATGACGGCTCCACAGACGCCGGATGTCG
CCCGAAGAGGCGCCGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATCGTCTTCTTAGGGAATAGCATCGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTC
TTGCTATTGGATGCTCAGGACTCTACCAAAGATATCAGGCTCTTCATTAATTCCCCCGGCGGCTCTCTCAGTGCTACAATGGCAATCTACGATGTCGTACAGCTCGTGAG
GGCTGATGTCTCCACAATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGCAAGCGTCTCGCAATGCCTAATGCACGTATTATGG
TTCATCAACCTCTTGGAGGGGCGAGTGGTCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACGTAACGAGAATTATCTCCGAATTCACT
GGCCATCCGTTTGATAAAGTCCAAAAAGATATTGATAGGGATCGTTATATGTCGCCGATAGAGGCGGTTGAATATGGATTGATTGATGGAGTTATTGACAAAGATAGCAT
TATACCTCTCATGCCAGTGCCAGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTTTTGACACCAGATGTCCCCGACGACGAGATAT
AC
Protein sequenceShow/hide protein sequence
MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASPCSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQL
LLLDAQDSTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFT
GHPFDKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY