CuGenDBv2

Gene ID	MS021078
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PCI domain-containing protein
Genome location	scaffold290:1066149..1066394
RNA-Seq Expression	MS021078
Synteny	MS021078
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component) GO:0005198 - structural molecule activity (molecular function)
InterPro domains	IPR035298 - 26S Proteasome non-ATPase regulatory subunit 13

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

MBA0554432.1 hypothetical protein [Gossypium lobatum]

1.2e-20

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

MBA0701484.1 hypothetical protein [Gossypium aridum]

1.2e-20

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

MBA0763688.1 hypothetical protein [Gossypium trilobum]

1.2e-20

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

MBA0852942.1 hypothetical protein [Gossypium schwendimanii]

1.2e-20

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

XP_022145313.1 26S proteasome non-ATPase regulatory subunit 13 homolog A [Momordica charantia]

5.2e-21

68.29

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++ +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

TrEMBL top hits

e value

%identity

Alignment

A0A1U8LTC0 26S proteasome non-ATPase regulatory subunit 13 homolog B-like

5.6e-21

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

A0A5D2JW92 PCI domain-containing protein

5.6e-21

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

A0A6J1CVM0 26S proteasome non-ATPase regulatory subunit 13 homolog A

2.5e-21

68.29

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++ +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

A0A7J9BLL7 PCI domain-containing protein (Fragment)

5.6e-21

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

A0A7J9BLN7 PCI domain-containing protein

5.6e-21

67.07

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYLDSLRN HPELADWYN+LADLYQKKLWHQLTLKLEQFVALTVFQ G    +   +++R+F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

SwissProt top hits

e value

%identity

Alignment

Q54NQ0 26S proteasome non-ATPase regulatory subunit 13

2.7e-04

43.9

Show/hide

Query:  LQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFV
        L+YL+ L+   P+L+D  N + D Y+ KLWHQLT ++E  +
Subjt:  LQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFV

Q8GYA6 26S proteasome non-ATPase regulatory subunit 13 homolog B

7.8e-20

57.32

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYL+S +N+HPEL +WYN+LADLYQKKLWHQLTLKLEQF+AL+VFQ G    +   +++ +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

Q8RWF0 26S proteasome non-ATPase regulatory subunit 13 homolog A

2.7e-20

58.54

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYL+SL+N+HPEL +WYN+LADLYQKKLWHQLTLKLEQF+AL VFQ G    +   + + +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

Arabidopsis top hits

e value

%identity

Alignment

AT4G19006.1 Proteasome component (PCI) domain protein

5.5e-21

57.32

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYL+S +N+HPEL +WYN+LADLYQKKLWHQLTLKLEQF+AL+VFQ G    +   +++ +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

AT5G45620.1 Proteasome component (PCI) domain protein

1.9e-21

58.54

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYL+SL+N+HPEL +WYN+LADLYQKKLWHQLTLKLEQF+AL VFQ G    +   + + +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

AT5G45620.2 Proteasome component (PCI) domain protein

1.9e-21

58.54

Show/hide

Query:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF
        MAALQYL+SL+N+HPEL +WYN+LADLYQKKLWHQLTLKLEQF+AL VFQ G    +   + + +F   F   I+  +  HF
Subjt:  MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCGCTTTACAGTACCTCGATTCTCTTCGTAACTCGCATCCGGAGCTTGCTGATTGGTACAATACGCTTGCAGATCTGTACCAGAAGAAGCTTTGGCATCAGCTCAC
ACTCAAGCTTGAGCAATTTGTCGCTCTGACTGTTTTCCAGGTCGGTTCTTTCAACTTTGAACGTTTTCAAAGGATATTTCGACATTTTGATTTGTGTTTCCGTGTTAGTA
TTTCAGCTTTTAGATGCTTTCATTTT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAALQYLDSLRNSHPELADWYNTLADLYQKKLWHQLTLKLEQFVALTVFQVGSFNFERFQRIFRHFDLCFRVSISAFRCFHF

MS021078 (gene) of Bitter gourd (TR) v1 genome