; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021100 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021100
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbinding partner of ACD11 1-like isoform X1
Genome locationscaffold290:1261439..1264368
RNA-Seq ExpressionMS021100
SyntenyMS021100
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448658.1 PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]1.3e-13292.96Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        MQIKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT  PGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVAD FNKVAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL

XP_022145369.1 binding partner of ACD11 1-like isoform X1 [Momordica charantia]6.3e-14399.29Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        M IKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
        IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL

XP_022145370.1 binding partner of ACD11 1-like isoform X2 [Momordica charantia]1.3e-13596.11Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        M IKTVKVSNVSLGASDRDVKEFFSFS  + +    SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
        IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL

XP_038906357.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.2e-13394.01Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        M IKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT APGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVADAFNKVAKAAGEVGQKTKEK V SEEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL

XP_038906358.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]3.2e-13494.37Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        MQIKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT APGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVADAFNKVAKAAGEVGQKTKEK V SEEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL

TrEMBL top hitse value%identityAlignment
A0A1S3BK74 binding partner of ACD11 1 isoform X26.4e-13392.96Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        MQIKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT  PGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVAD FNKVAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL

A0A1S3BK81 binding partner of ACD11 1 isoform X12.4e-13292.61Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        M IKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT  PGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVAD FNKVAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL

A0A5A7UH68 Binding partner of ACD11 1 isoform X26.4e-13392.96Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        MQIKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT  PGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVAD FNKVAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPP-EPQQRPKPEPAQGLIL

A0A6J1CUA3 binding partner of ACD11 1-like isoform X26.2e-13696.11Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        M IKTVKVSNVSLGASDRDVKEFFSFS  + +    SESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
        IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL

A0A6J1CV14 binding partner of ACD11 1-like isoform X13.1e-14399.29Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
        M IKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
        IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 11.4e-6856.23Show/hide
Query:  QIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAA
        Q+++VKV N+S GA++ D+KEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    A
Subjt:  QIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK
        +M NR+V++G SW A AFN+VA+AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-9469.09Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PAATGTTAPGA
        M + TVKVSNVSLGA+DRD+KEFFSFSGDI YLE QSE+ER++ AYVTFKD QGAETAVLLSGATIVD SV +++ PDY+L PEA A         +P A
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PAATGTTAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGS
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+FDKKIGFT+KI+ GT++V +KVREVDQK+QVSEKTKSA A AE  VSNAGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGS

Query:  AIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK
        AIM NR+V++G +WV  AFNKVAKAA EVGQK KEK   +EEE K+K V++FA+VHLSESPKAA++  E ++  K
Subjt:  AIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK

AT5G16840.1 binding partner of acd11 11.0e-6956.23Show/hide
Query:  QIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAA
        Q+++VKV N+S GA++ D+KEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    A
Subjt:  QIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK
        +M NR+V++G SW A AFN+VA+AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK

AT5G16840.2 binding partner of acd11 19.0e-7156.98Show/hide
Query:  QIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAA
        Q+++VKV N+S GA++ D+KEFFSFSG++E +++QS +E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    A
Subjt:  QIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA
        ES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE  VS+AGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSA

Query:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK
        +M NR+V++G SW A AFN+VA+AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Subjt:  IMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK

AT5G16840.3 binding partner of acd11 11.3e-6956.02Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGA
        M +++VKV N+S GA++ D+KEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PPAA    T    
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAAT-GTTAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGS
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+ D+KIG ++K++AGT LV++K++ VDQ FQV+E+TKS +A AE  VS+AGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGS

Query:  AIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK
        A+M NR+V++G SW A AFN+VA+AAGEVGQKTKEK  A +  Q    +++  E ++ +H SE  K
Subjt:  AIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASEEEQ----KKKTVEDFAQVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-8662.99Show/hide
Query:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP----PAATGTTA
        M + TVKVSNVSL A++RD+KEFFSFSGDI YLE QSE++ S+ AYVTFKD QGAETAVLL+G+TIVD SV +T+ PDY+LPP+A A       +  +++
Subjt:  MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP----PAATGTTA

Query:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVS
        P   + S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQL+STASA+V +FDK+IGFTEKI+ GT +VS+KV+EVDQKFQV+EKTKSA A AE  VS
Subjt:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVS

Query:  NAGSAIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEK--FVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK
        NAGSAIM NR+V++G +WV  AFN+V+KAA EVGQK KEK      EEE+KKK V++ A VHL+ESPKA     +  + P+
Subjt:  NAGSAIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEK--FVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATTAAGACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGACCGAGACGTCAAGGAATTTTTTTCCTTTTCCGGTGACATTGAATATCTGGAAATGCAGAG
TGAAAGTGAACGGTCTCAAACTGCTTACGTAACCTTTAAAGATGCACAAGGAGCTGAAACTGCCGTCCTTCTATCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCA
CTCTGTGTCCTGATTATGAGCTCCCTCCGGAAGCTACTGCACCACCCGCTGCCACAGGAACTACAGCACCTGGTGCTGCTGAATCCGCCTTCCGGAAAGCAGAGGATGTG
GTTAGTGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGACGCACTGAACTCAGCAAAGGCATTTGATGAGAAACATCAGTTATCTTCCACGGCTTCAGCCAAAGTTGC
TACATTCGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACTTTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTA
AATCAGCATTTGCAGTTGCAGAGGTAAAAGTTAGCAATGCTGGTTCTGCCATCATGAATAACCGATTTGTAATGAGCGGGACTAGCTGGGTTGCCGATGCTTTCAATAAG
GTAGCTAAGGCAGCCGGAGAAGTTGGTCAGAAAACAAAAGAGAAATTCGTGGCGTCCGAGGAAGAACAGAAAAAGAAGACAGTCGAAGATTTTGCTCAGGTCCATCTCTC
GGAATCCCCTAAAGCAGCAACCGCGCCTCCTGAGCCTCAACAACGTCCCAAGCCAGAACCTGCTCAAGGTCTGATCCTC
mRNA sequenceShow/hide mRNA sequence
ATGCAGATTAAGACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGACCGAGACGTCAAGGAATTTTTTTCCTTTTCCGGTGACATTGAATATCTGGAAATGCAGAG
TGAAAGTGAACGGTCTCAAACTGCTTACGTAACCTTTAAAGATGCACAAGGAGCTGAAACTGCCGTCCTTCTATCTGGAGCAACTATAGTGGATCTTTCTGTCAACATCA
CTCTGTGTCCTGATTATGAGCTCCCTCCGGAAGCTACTGCACCACCCGCTGCCACAGGAACTACAGCACCTGGTGCTGCTGAATCCGCCTTCCGGAAAGCAGAGGATGTG
GTTAGTGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGACGCACTGAACTCAGCAAAGGCATTTGATGAGAAACATCAGTTATCTTCCACGGCTTCAGCCAAAGTTGC
TACATTCGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACTTTGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACTA
AATCAGCATTTGCAGTTGCAGAGGTAAAAGTTAGCAATGCTGGTTCTGCCATCATGAATAACCGATTTGTAATGAGCGGGACTAGCTGGGTTGCCGATGCTTTCAATAAG
GTAGCTAAGGCAGCCGGAGAAGTTGGTCAGAAAACAAAAGAGAAATTCGTGGCGTCCGAGGAAGAACAGAAAAAGAAGACAGTCGAAGATTTTGCTCAGGTCCATCTCTC
GGAATCCCCTAAAGCAGCAACCGCGCCTCCTGAGCCTCAACAACGTCCCAAGCCAGAACCTGCTCAAGGTCTGATCCTC
Protein sequenceShow/hide protein sequence
MQIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAAESAFRKAEDV
VSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVSEKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNK
VAKAAGEVGQKTKEKFVASEEEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQGLIL