CuGenDBv2

Gene ID	MS021112
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome C assembly protein
Genome location	scaffold290:1337324..1337566
RNA-Seq Expression	MS021112
Synteny	MS021112
Gene Ontology terms	GO:0015886 - heme transport (biological process) GO:0017004 - cytochrome complex assembly (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0015232 - heme transporter activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR003557 - Cytochrome c-type biogenesis protein CcmC

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALE29214.1 cytochrome c biogenesis C [Heuchera parviflora var. saurensis]

1.2e-30

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

QVD39111.1 cytochrome c biogenesis C [Gleditsia sinensis]

1.2e-30

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

YP_004849340.1 cytochrome c biogenesis C [Cucumis sativus]

1.2e-30

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

YP_009498146.1 cytochrome c biogenesis C [Senna tora]

2.1e-30

95.06

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQI+IGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

YP_009913608.1 cytochrome c biogenesis C [Luffa acutangula]

1.2e-30

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

TrEMBL top hits

e value

%identity

Alignment

A0A0M4N316 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

5.9e-31

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

A0A2Z4HGQ1 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

1.0e-30

95.06

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQI+IGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

A0A5J6NGL6 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

1.0e-30

95.06

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQI+IGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

A0A7D6BYD9 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

5.9e-31

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

G3EIZ2 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

5.9e-31

96.3

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAM IHLSLRVAPLDLQQGGNS ILYVHVPA RMSILVYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

SwissProt top hits

e value

%identity

Alignment

P38453 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

8.8e-16

60.49

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        M + LL+P F M  +  YAQILIG   FLTAM I+LS+ VAP D QQG N  I+YVHVPA  MS+L+YIA AI++ LFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

P92527 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

1.2e-28

86.42

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MS+SLLQPSFLMSKTRSYAQILIGS LFLTAM I+LSL VAPLD QQGGNS ILYVHVP   MSI+VYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

Arabidopsis top hits

e value

%identity

Alignment

AT2G07681.1 Cytochrome C assembly protein

9.6e-26

91.04

Show/hide

Query:  TRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        TRSYAQILIGS LFLTAM IHLSL VAPLDLQQGGNS ILYVHVPA RMSI+VYIATAINTFLFLLT
Subjt:  TRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

AT2G07771.2 Cytochrome C assembly protein

2.4e-32

91.36

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MS+SLLQPSFLMSKTRSYAQILIGS LFLTAM IHLSL VAPLDLQQGGNS ILYVHVPA RMSI+VYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

ATMG00900.1 cytochrome C biogenesis 256

2.4e-32

91.36

Show/hide

Query:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT
        MS+SLLQPSFLMSKTRSYAQILIGS LFLTAM IHLSL VAPLDLQQGGNS ILYVHVPA RMSI+VYIATAINTFLFLLT
Subjt:  MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTCTTTCGTTATTACAACCTTCTTTTTTGATGTCAAAGACCAGAAGCTATGCACAAATTCTCATTGGATCTCGGTTGTTCTTAACAGCGATGACTATTCATTTAAG
TCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCATATTCTGTATGTACATGTTCCTGCGACTCGGATGAGTATTCTCGTTTATATCGCTACGGCTATAA
ACACTTTCTTGTTCCTATTAACA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMTIHLSLRVAPLDLQQGGNSHILYVHVPATRMSILVYIATAINTFLFLLT

MS021112 (gene) of Bitter gourd (TR) v1 genome