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MS021115 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021115
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold290:1399433..1399543
RNA-Seq ExpressionMS021115
SyntenyMS021115
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]3.1e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSI++N K RGK  A+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
BBN68784.1 TatD related DNase [Prunus dulcis]3.1e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSI++N K RGK  A+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
PRQ44942.1 putative RNA-directed DNA polymerase [Rosa chinensis]6.2e-0671.43Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSIL+N + RGK DA+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]3.1e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSI++N K RGK  A+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]2.3e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+SSANFS+ +N + RGKI A R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
TrEMBL top hitse value%identityAlignment
A0A2P6REU1 Putative RNA-directed DNA polymerase3.0e-0671.43Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSIL+N + RGK DA+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
A0A4Y1RS61 TatD related DNase1.5e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSI++N K RGK  A+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
A0A5H2XP17 TatD related DNase1.5e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSI++N K RGK  A+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
A0A5H2XQW2 TatD related DNase1.5e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+ SANFSI++N K RGK  A+R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
A0A6J1E196 uncharacterized protein LOC1110250191.1e-0568.57Show/hide
Query:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
        GC+SSANFS+ +N + RGKI A R +RQGDPLSPF
Subjt:  GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTGCATTTCTTCAGCAAATTTCTCAATCCTCCTAAATGACAAGTCGCGTGGTAAAATCGATGCTAATAGGGCGATTCGTCAAGGTGATCCTTTGTCACCTTTTTTTAT
T
mRNA sequenceShow/hide mRNA sequence
GGGTGCATTTCTTCAGCAAATTTCTCAATCCTCCTAAATGACAAGTCGCGTGGTAAAATCGATGCTAATAGGGCGATTCGTCAAGGTGATCCTTTGTCACCTTTTTTTAT
T
Protein sequenceShow/hide protein sequence
GCISSANFSILLNDKSRGKIDANRAIRQGDPLSPFFI