; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021226 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021226
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L13
Genome locationscaffold358:165763..168527
RNA-Seq ExpressionMS021226
SyntenyMS021226
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-12491.53Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFSLHSTLNN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP+SSV QVRAQ+LDRVPLEQRWMF+GDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022134203.1 50S ribosomal protein L13, chloroplastic [Momordica charantia]5.6e-13598.39Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST+NNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQ+RAQ+LDRVPLEQRWMFEGDELDGPDIWNTTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]5.2e-12591.94Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFSLHSTLNN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP+SSV QVRAQ+LDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022981281.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]1.5e-12491.53Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFSLHST NN   SNR IPRKSLVAGFPLP SKSSFLQTQT ITL SKP+SSV QVRAQ+LDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]6.8e-12591.94Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFSLHSTLNNG  SNR +PR SLVAGFPL  SKSSFLQTQT ITL SKP+SSVLQVRAQ+LDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein4.2e-12087.5Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSST TFSLHSTL NG TSN+  PR SL+  FPLP SKSSFL TQT+I+L S  + S LQVRAQ+LDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEK+AVSG+KRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1C1B3 50S ribosomal protein L13, chloroplastic2.7e-13598.39Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST+NNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQ+RAQ+LDRVPLEQRWMFEGDELDGPDIWNTTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like1.7e-12189.52Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSST TF +HSTLNNG+ SNRGIPRKS V GFPLP SKS  L TQT ITLNS+ +SS +QVRAQ+LDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like2.5e-12591.94Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFSLHSTLNN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP+SSV QVRAQ+LDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like7.4e-12591.53Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFSLHST NN   SNR IPRKSLVAGFPLP SKSSFLQTQT ITL SKP+SSV QVRAQ+LDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B1WQT8 50S ribosomal protein L139.8e-5070.99Show/hide
Query:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK
        ++ WYV+DATD+ LGRLA  +A  +RGKN PTYTP +D G FVI++NA+KVAV+GRK T+KLYRRHSGRPGGMK+ETFE+LQQRIPERIIE AV+GMLPK
Subjt:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LGR LF  LKVY GP+HPH+AQKP EL +
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

P12629 50S ribosomal protein L13, chloroplastic2.8e-8163.2Show/hide
Query:  MLCASS----STATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTW
        M CASS    S  T       N   T     PR ++ A   +   KS+   T+         E+   +     +  VPL+QRWMF  +E  GPDIWNTTW
Subjt:  MLCASS----STATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTW

Query:  YPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERII
        YPK+ADHV T+K WYVVDATD ILGR+ASTIAIHIRGKNL +YTPSVDMGAFVIVVNA+KVAVSG+KRT+KLYRRHSGRPGG+K ETF+QLQ+RIPERII
Subjt:  YPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERII

Query:  EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        EHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P++LP+RDKRI  E+
Subjt:  EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L132.6e-5074.05Show/hide
Query:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK
        E+ WYVVDATDK LGRLAS IA+ +RGKN   YTP +D G FVIVVNAEKVAV+G+KRT+KLYRRHSGRPGGMK ETF +LQQR+PERI+EHAV+GMLPK
Subjt:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q8YPK6 50S ribosomal protein L137.5e-5073.28Show/hide
Query:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK
        E+ WYVVDATDK LGRLAS IA+ +RGKN   YTP +D G FVIVVNA+KVAV+G+KRT+KLYRRHSGRPGGMK ETF +LQQR+PERI+EHAV+GMLPK
Subjt:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic1.2e-8767.72Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQVRAQ-----QLDRVPLEQRWMFEGDELDGPDIW
        MA+LC+SS+         L++ +  + G  RKS   GF L   SK S    +  I  NSK     LQV+ +         VP  QRWMF+ +E +GPDIW
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQVRAQ-----QLDRVPLEQRWMFEGDELDGPDIW

Query:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP
        NTTWYPKA+DHVNT+K W+VVDATDKILGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSG+KR +KLYRRHSGRPGGM VETF+QLQQRIP
Subjt:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        ERI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein8.4e-8967.72Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQVRAQ-----QLDRVPLEQRWMFEGDELDGPDIW
        MA+LC+SS+         L++ +  + G  RKS   GF L   SK S    +  I  NSK     LQV+ +         VP  QRWMF+ +E +GPDIW
Subjt:  MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQVRAQ-----QLDRVPLEQRWMFEGDELDGPDIW

Query:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP
        NTTWYPKA+DHVNT+K W+VVDATDKILGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSG+KR +KLYRRHSGRPGGM VETF+QLQQRIP
Subjt:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        ERI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +GRK T+K YR H+G  G +K  + +    + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE

AT3G01790.2 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +GRK T+K YR H+G  G +K  + +    + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTCTTTACATTCCACTCTCAACAATGGGGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGG
TTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAAGTGCGGGCTCAGCAGCTCGATC
GCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAA
ACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCCAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTCTTTACATTCCACTCTCAACAATGGGGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGG
TTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAAGTGCGGGCTCAGCAGCTCGATC
GCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAA
ACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCCAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA
Protein sequenceShow/hide protein sequence
MAMLCASSSTATFSLHSTLNNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQVRAQQLDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEK
TWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHEAQKPVELPIRDKRINKER