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MS021252 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021252
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase subunit beta, chloroplastic
Genome locationscaffold358:492786..492920
RNA-Seq ExpressionMS021252
SyntenyMS021252
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAD37036.1 ATP synthase beta subunit, partial [Buxus sempervirens]8.0e-0881.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
ABU75178.1 AtpB, partial [Picrolemma sprucei]8.0e-0881.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
Q85V50.1 RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta [Pseudogaltonia clavata]8.0e-0881.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
YP_009751997.1 CF1 subunit beta [Cionosicys macranthus]8.0e-0875.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VRAVAMSAT+ LTRGMEV+DTR P SV VGG TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
YP_010043943.1 ATP synthase CF1 beta subunit [Securigera varia]4.7e-0875.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        +RAVAMSAT+ LTRGMEVIDTR P SV VGG+TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
TrEMBL top hitse value%identityAlignment
A0A0C5GJL7 ATP synthase subunit beta (Fragment)3.9e-0881.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
A0A1X9Q1E6 ATP synthase subunit beta, chloroplastic3.9e-0875.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VRAVAMSAT+ LTRGMEV+DTR P SV VGG TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
A0A218KG42 ATP synthase subunit beta, chloroplastic3.9e-0875.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VRAVAMSAT+ LTRGMEV+DTR P SV VGG TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
A0A517LRP6 ATP synthase subunit beta, chloroplastic3.9e-0881.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
A0A7S8WSA8 ATP synthase CF1 beta subunit2.3e-0875.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        +RAVAMSAT+ LTRGMEVIDTR P SV VGG+TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
SwissProt top hitse value%identityAlignment
A6MM43 ATP synthase subunit beta, chloroplastic1.1e-1081.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
Q09MH1 ATP synthase subunit beta, chloroplastic4.0e-1079.07Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDT  P SV VGG+TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
Q4VZI5 ATP synthase subunit beta, chloroplastic1.1e-1075.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VRAVAMSAT+ LTRGMEV+DTR P SV VGG TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
Q85V50 ATP synthase subunit beta, chloroplastic1.1e-1081.4Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT+ LTRGMEVIDTR P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
Q9MRM0 ATP synthase subunit beta, chloroplastic5.2e-1075.56Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VRAVAMSAT+ LTRGMEVIDT  P SV VGG TL RIFNVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
Arabidopsis top hitse value%identityAlignment
AT5G08670.1 ATP synthase alpha/beta family protein5.2e-0548.89Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VR +AM  T  L RG +V++T  P +V VG  TL RI NVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
AT5G08680.1 ATP synthase alpha/beta family protein5.2e-0548.89Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VR +AM  T  L RG +V++T  P +V VG  TL RI NVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
AT5G08690.1 ATP synthase alpha/beta family protein5.2e-0548.89Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
        VR +AM  T  L RG +V++T  P +V VG  TL RI NVLG+ +
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL
ATCG00480.1 ATP synthase subunit beta2.0e-0969.77Show/hide
Query:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD
        VRAVAMSAT  L RGM+V+D  +P SV VGG TL RIFNVLG+
Subjt:  VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTAGAGCGGTAGCTATGAGTGCTACAAATAGTCTAACGAGAGGAATGGAAGTGATTGACACGAGAGATCCTACAAGTGTTCTAGTTGGCGGGATGACTCTCGACCGAAT
TTTCAACGTTTTGGGAGATAGTCTT
mRNA sequenceShow/hide mRNA sequence
GTTAGAGCGGTAGCTATGAGTGCTACAAATAGTCTAACGAGAGGAATGGAAGTGATTGACACGAGAGATCCTACAAGTGTTCTAGTTGGCGGGATGACTCTCGACCGAAT
TTTCAACGTTTTGGGAGATAGTCTT
Protein sequenceShow/hide protein sequence
VRAVAMSATNSLTRGMEVIDTRDPTSVLVGGMTLDRIFNVLGDSL