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MS021258 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021258
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR-RELATED 3
Genome locationscaffold358:532387..532647
RNA-Seq ExpressionMS021258
SyntenyMS021258
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR039616 - CLAVATA3/ESR (CLE)-related protein 1/3/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]2.6e-1877.78Show/hide
Query:  LLW-LVLILLLCSSISESRLL-SPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        L W LVLILLLCSSISESRLL SPS S S SS+ N K   N+LFV+N  E+LK IIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  LLW-LVLILLLCSSISESRLL-SPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
XP_031267366.1 CLAVATA3/ESR (CLE)-related protein 3-like [Pistacia vera]1.6e-0442.42Show/hide
Query:  ISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        +S + LL          +  Y  +E ++ +EN +E+LK  ++ +E LG+ F SKRLSPGGPDPRHH
Subjt:  ISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein1.2e-1877.78Show/hide
Query:  LLW-LVLILLLCSSISESRLL-SPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        L W LVLILLLCSSISESRLL SPS S S SS+ N K   N+LFV+N  E+LK IIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  LLW-LVLILLLCSSISESRLL-SPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06225.1 CLAVATA3/ESR-RELATED 32.9e-0443.02Show/hide
Query:  MACLKFLLWLVLILLL-CSSISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        MA LK  + LVL+L+L  +S+ E R L   +   FS +   K+   +LF E ++E+      E+  LG    SKRLSPGGPDPRHH
Subjt:  MACLKFLLWLVLILLL-CSSISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
AT1G73165.1 CLAVATA3/ESR-RELATED 16.5e-0444.71Show/hide
Query:  MACLKFLLWLVLILLLCSSISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        MA LKFLL L LI   C S+S     S +S   F +A   KR    +  E   E+LK  +E+  + G +  S RLSPGGPDPRHH
Subjt:  MACLKFLLWLVLILLLCSSISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTTAATGGCTTGTTTGAAGTTCTTATTGTGGCTTGTGCTGATATTGCTCTTGTGTTCCTCCATTTCTGAAAGTCGCTTGCTTTCTCCTTCATCTTCTTCTTCTTTTTC
TTCTGCTGTGAATTATAAGAGAAATGAAAACCAGCTATTTGTGGAGAATGTCAGAGAAATCTTGAAGGTTATCATTGAAGAGAAAGAGAAGCTTGGAAGGCATTTTGTGT
CCAAAAGACTCAGCCCAGGAGGCCCTGATCCACGCCATCAT
mRNA sequenceShow/hide mRNA sequence
ATCTTAATGGCTTGTTTGAAGTTCTTATTGTGGCTTGTGCTGATATTGCTCTTGTGTTCCTCCATTTCTGAAAGTCGCTTGCTTTCTCCTTCATCTTCTTCTTCTTTTTC
TTCTGCTGTGAATTATAAGAGAAATGAAAACCAGCTATTTGTGGAGAATGTCAGAGAAATCTTGAAGGTTATCATTGAAGAGAAAGAGAAGCTTGGAAGGCATTTTGTGT
CCAAAAGACTCAGCCCAGGAGGCCCTGATCCACGCCATCAT
Protein sequenceShow/hide protein sequence
ILMACLKFLLWLVLILLLCSSISESRLLSPSSSSSFSSAVNYKRNENQLFVENVREILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH