; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021270 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021270
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionExonuclease domain-containing protein
Genome locationscaffold358:632658..635370
RNA-Seq ExpressionMS021270
SyntenyMS021270
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146041.1 uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus]1.9e-15984.15Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MFLRA LLK SSFYSIPCHPL+P+SL SS+ SS RTPF IRCH++ P +HEPSSSA     P+ ADNRWRP CLY+T G+CTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ ARSNH RT  QD D+FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        V+HQLW+KELGG LDRAAFVTCGNWDIKTQVPHQCSVS ++LPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
         DGA LQ+TARRNP SPQHVKFLFENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

XP_022139391.1 uncharacterized exonuclease domain-containing protein At3g15140 [Momordica charantia]1.2e-18898.78Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MFLRAPLLKVSSFYSIPC+PLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISR 
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVNARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLV
        LQVNARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPS MSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLV
Subjt:  LQVNARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLV

Query:  EHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVA
        EHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELP+YFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVA
Subjt:  EHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVA

Query:  DGARLQITARRNPNSPQHVKFLFENRI
        DGARLQITARRNPNSPQHVKFLFENRI
Subjt:  DGARLQITARRNPNSPQHVKFLFENRI

XP_022935722.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata]3.2e-16287.2Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MF+RAPLLKVSSFYSIPCH LVPL L S++ SS RTP  IRCH+SLP AH+PSSSA P  S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ A S H RT  QDI+FFLVLDLEGKVEIIEFPVILV+AKTL VTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        VEHQLW+KELGG LDRAAFVTCGNWDIKTQVPHQCSVSN++LPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
        ADGA LQITARRNPNSPQHVKF FENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

XP_022976542.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima]2.7e-16186.59Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MF+RAPLLKVSSFYSIPCH LVPLSL S++ SS RTP  IRCH+SLP AHEPSSSA P  S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ A S H RT  QDI+FFLVLDLEGKVEIIEFPVILV+AKTL VTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        VEHQ+W+K+LGG LDRAAFVTCGNWDIKTQVPHQCSVSN++LPDYFMEWINIKDVYLNFYQKKATGM  MMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
        ADGA LQITARRNPNSPQHVKF FENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

XP_023535410.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo subsp. pepo]3.5e-16186.59Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MF+RAPLLKVSSFYS+PCH LVPLSL +++ SS RTP  IRCH+SLP AHEPSSSA P  S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ A S H RT  QDI+FFLVLDLEGKVEIIEFPVILV+AKTL VTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        VEHQLW+KELGG LDRAAFVTCGNWDIKTQVPHQCSVSN++LPDYFMEWINIKDVYLNFYQKKATGM TMMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
        ADGA LQITARRNPNSPQ VKF FENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

TrEMBL top hitse value%identityAlignment
A0A0A0L4N2 Exonuclease domain-containing protein9.3e-16084.15Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MFLRA LLK SSFYSIPCHPL+P+SL SS+ SS RTPF IRCH++ P +HEPSSSA     P+ ADNRWRP CLY+T G+CTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ ARSNH RT  QD D+FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        V+HQLW+KELGG LDRAAFVTCGNWDIKTQVPHQCSVS ++LPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
         DGA LQ+TARRNP SPQHVKFLFENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

A0A1S3CJV9 uncharacterized exonuclease domain-containing protein At3g15140 isoform X13.9e-15883.54Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MFLRA LLK+SSFYSIPCHPL+P+SL SS+ SS RTPF IRCH++LP +HEPSSSA P   P+ ADNRWRP CLY+T G+CTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ ARSNH RT  QD+D+FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAI Y +VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        V+HQLW+KE GG LDRAAFVTCGNWDIKTQVPHQC+VS ++LPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+ L+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
         DGA LQITARRNP SPQ VKFLFENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

A0A6J1CCI3 uncharacterized exonuclease domain-containing protein At3g151405.6e-18998.78Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MFLRAPLLKVSSFYSIPC+PLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISR 
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVNARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLV
        LQVNARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPS MSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLV
Subjt:  LQVNARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLV

Query:  EHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVA
        EHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELP+YFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVA
Subjt:  EHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVA

Query:  DGARLQITARRNPNSPQHVKFLFENRI
        DGARLQITARRNPNSPQHVKFLFENRI
Subjt:  DGARLQITARRNPNSPQHVKFLFENRI

A0A6J1F6E0 uncharacterized exonuclease domain-containing protein At3g151401.5e-16287.2Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MF+RAPLLKVSSFYSIPCH LVPL L S++ SS RTP  IRCH+SLP AH+PSSSA P  S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ A S H RT  QDI+FFLVLDLEGKVEIIEFPVILV+AKTL VTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        VEHQLW+KELGG LDRAAFVTCGNWDIKTQVPHQCSVSN++LPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
        ADGA LQITARRNPNSPQHVKF FENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

A0A6J1IG11 uncharacterized exonuclease domain-containing protein At3g151401.3e-16186.59Show/hide
Query:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE
        MF+RAPLLKVSSFYSIPCH LVPLSL S++ SS RTP  IRCH+SLP AHEPSSSA P  S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISRE
Subjt:  MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRE

Query:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL
        LQV+ A S H RT  QDI+FFLVLDLEGKVEIIEFPVILV+AKTL VTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVN-ARSNHTRTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWL

Query:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV
        VEHQ+W+K+LGG LDRAAFVTCGNWDIKTQVPHQCSVSN++LPDYFMEWINIKDVYLNFYQKKATGM  MMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV

Query:  ADGARLQITARRNPNSPQHVKFLFENRI
        ADGA LQITARRNPNSPQHVKF FENRI
Subjt:  ADGARLQITARRNPNSPQHVKFLFENRI

SwissProt top hitse value%identityAlignment
A6QLH5 ERI1 exoribonuclease 39.6e-2128.02Show/hide
Query:  QDIDFFLVLDLEGKV--------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWK
        Q   +FLVLD E           EIIEFP++ ++ +T+ +   FH +V+P  +   ++  +        G+ +   D   S ++V+++ ++W+ +  L  
Subjt:  QDIDFFLVLDLEGKV--------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWK

Query:  KELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVY---LNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGA
          +     ++ FVTCG+WD+K  +P QC    + + DYF +WIN+K  Y   +  + K   G+  M + L +  +G  H GIDD KNI  +++ +   G 
Subjt:  KELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVY---LNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGA

Query:  RLQITAR
          + T++
Subjt:  RLQITAR

Q5FVR4 3'-5' exoribonuclease 13.0e-2229.76Show/hide
Query:  DFFLVLDLEGKV----------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKK
        D+  ++D E             EIIEFPV+L++  +L +   F ++VRP   S+  ++E+     G  G+ +   D A ++ +V+++  +W+   +L   
Subjt:  DFFLVLDLEGKV----------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKK

Query:  ELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQ--KKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARL
           G   +   +T G+WD+   +  QC +S ++ P +  +WINI+  Y NFY+  +  T +T M+ +L +   G  H G+DD+KNI R+  RM+ DG  L
Subjt:  ELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQ--KKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARL

Query:  QITAR
        +I  +
Subjt:  QITAR

Q7TMF2 3'-5' exoribonuclease 18.7e-2229.76Show/hide
Query:  DFFLVLDLEGKV----------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKK
        D+  ++D E             EIIEFPV+L++  TL +   F ++VRP      +++E+     G  G+ +   D A ++ +V+++  +W+   +L   
Subjt:  DFFLVLDLEGKV----------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKK

Query:  ELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQ--KKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARL
           G   +   +T G+WD+   +  QC +S ++ P +  +WINI+  Y NFY+  +  T +T M+ +L +   G  H G+DD+KNI R+  RM+ DG  L
Subjt:  ELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQ--KKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARL

Query:  QITAR
        +I  +
Subjt:  QITAR

Q8IV48 3'-5' exoribonuclease 11.9e-2129.27Show/hide
Query:  DFFLVLDLEGKV----------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKK
        D+  ++D E             EIIEFPV+L++  TL +   F ++VRP      +++++        G+ +   D A ++ +V+++  DW+   +L   
Subjt:  DFFLVLDLEGKV----------EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKK

Query:  ELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQ--KKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARL
           G   + + +T G+WD+   +  QC +S ++ P +  +WINI+  Y NFY+  +  T +T M+ +L +   G  H G+DD+KNI R+  RM+ DG  L
Subjt:  ELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQ--KKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARL

Query:  QITAR
        +I  +
Subjt:  QITAR

Q8W566 Uncharacterized exonuclease domain-containing protein At3g151401.1e-10461.07Show/hide
Query:  SSSRTPFPIRCHASLPAAHEPSSSAPPPHS-PEAADN-RWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRELQVNARSNHTRTQSQDIDFFLVLDLEGKV
        +SS +  P    +   ++   SSS+P   S  E ++N RWRPMCLYYT GKCT MDDP HL+ FNHD S+EL+V A ++  R +SQ+ +FFLV+DLEGKV
Subjt:  SSSRTPFPIRCHASLPAAHEPSSSAPPPHS-PEAADN-RWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRELQVNARSNHTRTQSQDIDFFLVLDLEGKV

Query:  EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQ
        EI+EFP+++V AKT+ V   FHRFVRP++MSE+ IN+YIEGKYG+ GVDRVWHDTAI +K+V+++FE WL EH LW K+    L+ AAFVTCGNWDIKT+
Subjt:  EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQ

Query:  VPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARLQITARRNPNSPQHVKFLFENRI
        +P QC VSNI LP YFMEWIN+KDVYLNFY ++A GM +MMRQ  I L+GSHHLGIDDTKNI RV+QRM+++GA L++TARR+ ++ ++V+FLF+NRI
Subjt:  VPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARLQITARRNPNSPQHVKFLFENRI

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.6e-10661.07Show/hide
Query:  SSSRTPFPIRCHASLPAAHEPSSSAPPPHS-PEAADN-RWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRELQVNARSNHTRTQSQDIDFFLVLDLEGKV
        +SS +  P    +   ++   SSS+P   S  E ++N RWRPMCLYYT GKCT MDDP HL+ FNHD S+EL+V A ++  R +SQ+ +FFLV+DLEGKV
Subjt:  SSSRTPFPIRCHASLPAAHEPSSSAPPPHS-PEAADN-RWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRELQVNARSNHTRTQSQDIDFFLVLDLEGKV

Query:  EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQ
        EI+EFP+++V AKT+ V   FHRFVRP++MSE+ IN+YIEGKYG+ GVDRVWHDTAI +K+V+++FE WL EH LW K+    L+ AAFVTCGNWDIKT+
Subjt:  EIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQ

Query:  VPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARLQITARRNPNSPQHVKFLFENRI
        +P QC VSNI LP YFMEWIN+KDVYLNFY ++A GM +MMRQ  I L+GSHHLGIDDTKNI RV+QRM+++GA L++TARR+ ++ ++V+FLF+NRI
Subjt:  VPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARLQITARRNPNSPQHVKFLFENRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGAGAGCTCCGCTGCTTAAGGTTTCATCATTTTACTCGATCCCATGTCATCCTCTGGTTCCCTTATCTCTCTATTCCTCGGTTTTTTCTTCTTCTCGCACACC
ATTTCCTATCCGATGCCACGCATCTCTCCCCGCAGCCCACGAACCATCTTCTTCAGCTCCTCCGCCTCACTCCCCCGAGGCGGCTGATAATCGTTGGAGGCCCATGTGTT
TGTATTACACGCAGGGCAAATGCACAATGATGGATGACCCACTCCACCTAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAAGTAAATGCTAGGTCAAACCATACG
CGAACTCAGAGTCAGGATATTGATTTTTTTCTGGTACTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAGTGCCAAGACATTGGGTGTGAC
AGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACGAAGGATAAATGAATACATTGAAGGAAAATATGGAAAATTTGGAGTTGATCGTGTCTGGCATGACA
CAGCCATATCATACAAGGAAGTTATTCAACAGTTCGAAGATTGGCTAGTTGAGCATCAGCTATGGAAGAAGGAACTGGGTGGGTGTCTTGATCGAGCAGCATTTGTGACA
TGTGGCAACTGGGATATAAAAACTCAGGTTCCACATCAATGCAGCGTGTCGAATATAGAACTTCCCGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTCAA
CTTTTACCAAAAGAAGGCGACAGGAATGACGACGATGATGAGACAACTCGAAATACCCTTGTTAGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATTGTGAGAG
TTCTACAGAGAATGGTTGCTGATGGTGCACGTTTGCAGATCACAGCACGTAGGAATCCTAATTCTCCTCAGCATGTTAAATTTCTTTTTGAGAACCGTATT
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTGAGAGCTCCGCTGCTTAAGGTTTCATCATTTTACTCGATCCCATGTCATCCTCTGGTTCCCTTATCTCTCTATTCCTCGGTTTTTTCTTCTTCTCGCACACC
ATTTCCTATCCGATGCCACGCATCTCTCCCCGCAGCCCACGAACCATCTTCTTCAGCTCCTCCGCCTCACTCCCCCGAGGCGGCTGATAATCGTTGGAGGCCCATGTGTT
TGTATTACACGCAGGGCAAATGCACAATGATGGATGACCCACTCCACCTAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAAGTAAATGCTAGGTCAAACCATACG
CGAACTCAGAGTCAGGATATTGATTTTTTTCTGGTACTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAGTGCCAAGACATTGGGTGTGAC
AGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACGAAGGATAAATGAATACATTGAAGGAAAATATGGAAAATTTGGAGTTGATCGTGTCTGGCATGACA
CAGCCATATCATACAAGGAAGTTATTCAACAGTTCGAAGATTGGCTAGTTGAGCATCAGCTATGGAAGAAGGAACTGGGTGGGTGTCTTGATCGAGCAGCATTTGTGACA
TGTGGCAACTGGGATATAAAAACTCAGGTTCCACATCAATGCAGCGTGTCGAATATAGAACTTCCCGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTCAA
CTTTTACCAAAAGAAGGCGACAGGAATGACGACGATGATGAGACAACTCGAAATACCCTTGTTAGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATTGTGAGAG
TTCTACAGAGAATGGTTGCTGATGGTGCACGTTTGCAGATCACAGCACGTAGGAATCCTAATTCTCCTCAGCATGTTAAATTTCTTTTTGAGAACCGTATT
Protein sequenceShow/hide protein sequence
MFLRAPLLKVSSFYSIPCHPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPHSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRELQVNARSNHT
RTQSQDIDFFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVT
CGNWDIKTQVPHQCSVSNIELPDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMVADGARLQITARRNPNSPQHVKFLFENRI