CuGenDBv2

Gene ID	MS021284
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PRA1 family protein
Genome location	scaffold358:718356..720272
RNA-Seq Expression	MS021284
Synteny	MS021284
Gene Ontology terms	GO:0016192 - vesicle-mediated transport (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0005794 - Golgi apparatus (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004895 - Prenylated rab acceptor PRA1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591944.1 PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-111

85.12

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A A PT  +P     + APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD+YPVVWQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+ NRK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

XP_022935725.1 PRA1 family protein H-like [Cucurbita moschata]

7.1e-111

84.71

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT  +P     + APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD+YPVVWQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+ NRK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

XP_022976569.1 PRA1 family protein H-like [Cucurbita maxima]

1.2e-110

84.3

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT  +P    ++ APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRW LD+YPVVWQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+ NRK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

XP_023535020.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo]

1.2e-110

84.3

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT  +P    ++ APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD+YPVVWQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCAL +GY GM+ HAAFRKLTL +PPS+ NRK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

XP_038898448.1 PRA1 family protein H [Benincasa hispida]

1.2e-110

85.54

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFS NPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A A PT  +P+++    APLATGFFISLFSR+GTLLS+FTLNPFAKLSAADFSG T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GLISCLALWDVVKFCGDRWGLD+YPV+WQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+ NFQMA+FCALGIGY GM+ HAAFRKLTL KPP+  +RK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4P4 PRA1 family protein

9.4e-109

84.3

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSAA PA PT        ++ APLATGFFISLFSR+ TLLS+FTLNPFAKLSAADFSG T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWT+ FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GLISCLALWD+VKFC DRWGLD+YPV+WQCLVRIAQC TVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALGIGY GM+ HAAFRKLT  KP ST +RK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

A0A1S3CLE4 PRA1 family protein

1.6e-108

83.88

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSAA P  PT        ++ APLATGFFISLFSR+ TLLS+FTLNPF+KLSAADFSG T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GLISCLALWD+VKFC DRWGLD+YPV+WQCLVRIAQC T II
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALGIGY GM+ HAAFRKLT  KPPST +RK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

A0A6J1F5I6 PRA1 family protein

3.5e-111

84.71

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT  +P     + APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD+YPVVWQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+ NRK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

A0A6J1FMA4 PRA1 family protein

1.6e-108

83.47

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFS NPLSLSVPDGAFDSWLRDSGYLEI+DQRTSD+HR+SSAAA A   ++  +S+++ T PLATGFFISLFSR+ TLLS+FTLNPFAKLSAADFSG T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS F+G F+SYSFPSSPAQARLR HENAKRYARNYASLFVLFFVCTLYQMP+AL+GLISC+ALWDVVKFC +RWGLD+YPVVWQCLVR+AQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALGIGY GM+ HAAFRKLTLAKPPSTG+RK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

A0A6J1IMK5 PRA1 family protein

5.9e-111

84.3

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT
        MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT  +P    ++ APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G T
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQT

Query:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII
        PSWTS FVGFF+SYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRW LD+YPVVWQCLVRIAQCVTVII
Subjt:  PSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVII

Query:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK
        LL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+ NRK
Subjt:  LLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTGNRK

SwissProt top hits

e value

%identity

Alignment

Q8LFP1 PRA1 family protein H

1.7e-70

57.89

Show/hide

Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASST--------APLATGFFISLFSRVGTLLSLFTLNPFAKLS
        M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT       SAAA A  +S+S SSSA++T        + +  GFF SL SR+ T+ SL T+NPF+KLS
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASST--------APLATGFFISLFSRVGTLLSLFTLNPFAKLS

Query:  AADFSGQTPSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRI
        A DFSG T  WT+ F+G  DSYSFPSS  QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLALVGL+  LALW++ K+C D+W  DR+P + +  + I
Subjt:  AADFSGQTPSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRI

Query:  AQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTG
         QC T ++L + N QMALF AL I Y+ M+ HA FRKLT +K P+ G
Subjt:  AQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTG

Arabidopsis top hits

e value

%identity

Alignment

AT4G27540.1 prenylated RAB acceptor 1.H

1.2e-71

57.89

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Query:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASST--------APLATGFFISLFSRVGTLLSLFTLNPFAKLS
        M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT       SAAA A  +S+S SSSA++T        + +  GFF SL SR+ T+ SL T+NPF+KLS
Subjt:  MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASST--------APLATGFFISLFSRVGTLLSLFTLNPFAKLS

Query:  AADFSGQTPSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRI
        A DFSG T  WT+ F+G  DSYSFPSS  QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLALVGL+  LALW++ K+C D+W  DR+P + +  + I
Subjt:  AADFSGQTPSWTSAFVGFFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRI

Query:  AQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTG
         QC T ++L + N QMALF AL I Y+ M+ HA FRKLT +K P+ G
Subjt:  AQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTG

Sequences

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CDS sequence

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ATGAGTTTCTCATCCAACCCACTCTCCCTCAGCGTTCCAGACGGCGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCT
CCACCGCAATTCCTCCGCCGCCGCCCCCGCCGGACCCACCTCCTCCTCCCCTTCTTCTTCCGCCTCCTCCACCGCCCCTCTTGCCACCGGTTTCTTCATCTCCCTCTTCT
CTCGCGTCGGCACCCTCCTCTCCCTTTTCACCCTCAATCCCTTTGCCAAGCTCTCTGCTGCGGATTTCTCTGGCCAGACCCCCTCCTGGACTTCTGCCTTTGTTGGGTTT
TTCGATTCGTACTCGTTTCCTTCGTCGCCGGCCCAAGCTCGTCTTCGAGTCCACGAGAATGCTAAACGCTATGCTCGCAACTACGCCTCCCTCTTTGTTCTCTTCTTCGT
CTGCACGCTGTACCAGATGCCTCTTGCCCTTGTTGGACTGATATCATGTTTAGCACTTTGGGACGTTGTTAAGTTTTGTGGCGATAGGTGGGGATTAGACAGATATCCAG
TTGTTTGGCAGTGTTTGGTTCGCATTGCCCAATGTGTGACTGTCATCATTCTTTTGTACTCCAACTTTCAAATGGCGCTCTTCTGTGCACTTGGCATTGGATACGCAGGC
ATGGTTTTTCATGCTGCATTTCGGAAGCTGACTCTTGCCAAGCCACCATCTACTGGAAATAGAAAA

mRNA sequence

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Protein sequence

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MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSSPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGF
FDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAG
MVFHAAFRKLTLAKPPSTGNRK

MS021284 (gene) of Bitter gourd (TR) v1 genome