CuGenDBv2

Gene ID	MS021287
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pre-mRNA-splicing factor CWC22 homolog
Genome location	scaffold358:752058..752789
RNA-Seq Expression	MS021287
Synteny	MS021287
Gene Ontology terms	GO:0016310 - phosphorylation (biological process) GO:0043086 - negative regulation of catalytic activity (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016301 - kinase activity (molecular function) GO:0019210 - kinase inhibitor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139633.1 uncharacterized protein LOC111010487 [Momordica charantia]

1.3e-115

97.54

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Query:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSC
        METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSC
Subjt:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSC

Query:  SSSTSARTSASDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKK
        SSSTSARTSASDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRR   
Subjt:  SSSTSARTSASDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKK

Query:  KKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPKRD
           KKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPKRD
Subjt:  KKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPKRD

XP_022941070.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]

8.3e-83

78.49

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Query:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-
        ME+RRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVY VD      RTSSVGSKDS MSSRSNS+N 
Subjt:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-

Query:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA
           SSC SSTSARTS+S+   V+R SSRFSSHQ K     SSVSAQVYGSSQRWQFIASVPVP TLSRENSRRKKAVE IGGKSD RR K+R E  TA  
Subjt:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA

Query:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK
             RKKKKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK +  M K
Subjt:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK

XP_022981938.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]

2.7e-81

78.49

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Query:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-
        ME+RRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVY VD      RTSSVGSKDS MSSRSNS+N 
Subjt:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-

Query:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA
           SSC SSTSARTS+S+   V+R SSRFSSHQ K     SSVSAQVYGSSQRWQFIAS  VPATLSRENSRRKKAVE IGGKSD RR K+RTE  TA  
Subjt:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA

Query:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK
            R+KKKKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK +  M K
Subjt:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK

XP_023525336.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo]

1.7e-83

78.88

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Query:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-
        ME+RRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVY VD      RTSSVGSKDS MSSRSNS+N 
Subjt:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-

Query:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA
           SSC SSTSARTS+S+   V+R SSRFSSHQ K     SSVSAQVYGSSQRWQFIASVPVP TLSRENSRRKKAVE IGGKSD RR K+RTE  TA  
Subjt:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA

Query:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK
             RKKKKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK +  M K
Subjt:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK

XP_038899281.1 probable membrane-associated kinase regulator 1 [Benincasa hispida]

2.9e-88

82.79

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Query:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN---
        ME+RREKSSSGE+FSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVD+SR  SRTSSVGSKDSFMSSRSNS+N   
Subjt:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN---

Query:  -SSCSSSTSARTSASD-----VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA
         SSC SSTSARTS+SD     V+  SSRFSS+Q K++QK SSVSAQVYGSSQRWQFIASV VP TLSRENSRRKK+VE IGGKSD RRKKRRTE    T+
Subjt:  -SSCSSSTSARTSASD-----VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA

Query:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRK
        TAR     KKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK
Subjt:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L251 Uncharacterized protein

2.2e-81

78.14

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Query:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDI-SRPASRTSSVGSKDSFMSSRSNSSN--
        ME+RRE  SS E+FSFPSTPV DQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPI VY VD+ SR  SRTSSVGSKDSFMSSRSNS+N  
Subjt:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDI-SRPASRTSSVGSKDSFMSSRSNSSN--

Query:  --SSCSSSTSARTSASD-------VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETAT
          SSC SSTSARTS+SD       +E  SSRFSS+Q K++QK SSVSAQVYGS QRWQFIASV VP +LSRENSRRKK+VE IGGKSD RRKKRR E   
Subjt:  --SSCSSSTSARTSASD-------VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETAT

Query:  ATATARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRK
         T+TAR     KKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK
Subjt:  ATATARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRK

A0A5D3DWZ9 Putative membrane-associated kinase regulator 1

6.4e-81

78.23

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Query:  METRREKSSSGEMFSFPSTPVQDQDS-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDI-SRPASRTSSVGSKDSFMSSRSNSSN-
        ME+RRE  SS E+FSFPSTPVQDQDS DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPI VY VD+ SR  SRTSSVGSKDSF+SSRSNS+N 
Subjt:  METRREKSSSGEMFSFPSTPVQDQDS-DFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDI-SRPASRTSSVGSKDSFMSSRSNSSN-

Query:  ---SSCSSSTSARTSASD-------VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETA
           SSC SSTSARTS+SD       +E  SSRFSS+Q K++QK SSVSAQVYGS QRWQFIASV VP +LSRENSRRKK+VE IGGKSD RR KRRTE  
Subjt:  ---SSCSSSTSARTSASD-------VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETA

Query:  TATATARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRK
          T+TAR    KKKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK
Subjt:  TATATARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRK

A0A6J1CG39 uncharacterized protein LOC111010487

6.1e-116

97.54

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Query:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSC
        METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSC
Subjt:  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSC

Query:  SSSTSARTSASDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKK
        SSSTSARTSASDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRR   
Subjt:  SSSTSARTSASDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKK

Query:  KKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPKRD
           KKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPKRD
Subjt:  KKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPKRD

A0A6J1FSH9 pre-mRNA-splicing factor CWC22 homolog

4.0e-83

78.49

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Query:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-
        ME+RRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVY VD      RTSSVGSKDS MSSRSNS+N 
Subjt:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-

Query:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA
           SSC SSTSARTS+S+   V+R SSRFSSHQ K     SSVSAQVYGSSQRWQFIASVPVP TLSRENSRRKKAVE IGGKSD RR K+R E  TA  
Subjt:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA

Query:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK
             RKKKKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK +  M K
Subjt:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK

A0A6J1J3G5 pre-mRNA-splicing factor CWC22 homolog

1.3e-81

78.49

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Query:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-
        ME+RRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVY VD      RTSSVGSKDS MSSRSNS+N 
Subjt:  METRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSN-

Query:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA
           SSC SSTSARTS+S+   V+R SSRFSSHQ K     SSVSAQVYGSSQRWQFIAS  VPATLSRENSRRKKAVE IGGKSD RR K+RTE  TA  
Subjt:  ---SSCSSSTSARTSASD---VERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATA

Query:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK
            R+KKKKKKKKKKK MW GRKVFRWIILVCKECHAIEPSRK +  M K
Subjt:  TARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIEPSRKTKSTMPK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53163.1 unknown protein

4.5e-10

30.65

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Query:  ETRREKSSSGEMFSFPSTPVQDQ-DSDFEFGSITPDSPST---FNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSS--RSNS
        + R+   +SGE  + P T ++    SDFEFGS+TP SPS      NSPADHLF+NGRLLPHSFP   I       +R  SRT+   S+++F S    S S
Subjt:  ETRREKSSSGEMFSFPSTPVQDQ-DSDFEFGSITPDSPST---FNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSS--RSNS

Query:  SNSSCSSSTSARTSASDVERSSSRFSSH--------------------------------------------------------------------QIKR
        S+SS  +S + RTS  ++ + +S  + H                                                                    Q KR
Subjt:  SNSSCSSSTSARTSASDVERSSSRFSSH--------------------------------------------------------------------QIKR

Query:  AQKSSSVSAQVYGS-SQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKKKKKKKKK----KTMWLGRKVFRWIIL
         + +  V+AQ+YGS S+RWQ I  V       RE S + K     GG     RKK+ T           RRKK KK ++++    K M   +++ + ++ 
Subjt:  AQKSSSVSAQVYGS-SQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKKKKKKKKK----KTMWLGRKVFRWIIL

Query:  VCKECHAIEP
         C+ECHA+EP
Subjt:  VCKECHAIEP

AT3G15250.1 unknown protein

8.7e-14

33.74

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Query:  STPVQDQDSDFEFGSITPDSPST---FNNSPADHLFVNGRLLPHSFPPQPIGVYT-----VDISRPASRTSSVGSKDSFMSSRSNSSNSSCSSSTSARTS
        +T   +   +FEFGS+TP SPS      NSPADHLF NGRLLPH+FP     +YT        S   SR +S  S  SF S+ S++S S  +S +++  +
Subjt:  STPVQDQDSDFEFGSITPDSPST---FNNSPADHLFVNGRLLPHSFPPQPIGVYT-----VDISRPASRTSSVGSKDSFMSSRSNSSNSSCSSSTSARTS

Query:  ASDVER---------------------SSSRFSSHQIKRAQKSSSVSAQVYG--SSQRWQFIASVPVPATLS-RENSRRKKAVENIGGKSDSRRKKRRTE
         S + +                     SSS +SS Q KR +     +  +Y   SSQRWQ+I  VPV  +   R   R+KKAV                 
Subjt:  ASDVER---------------------SSSRFSSHQIKRAQKSSSVSAQVYG--SSQRWQFIASVPVPATLS-RENSRRKKAVENIGGKSDSRRKKRRTE

Query:  TATATATARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIE
                  R +KK ++++  + M L RK+    I VC+ECHA+E
Subjt:  TATATATARNRRKKKKKKKKKKKTMWLGRKVFRWIILVCKECHAIE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGACGCGCCGGGAAAAGAGCTCCTCCGGCGAGATGTTCTCGTTTCCGAGCACTCCGGTTCAAGATCAGGATTCCGATTTCGAATTCGGATCGATTACTCCCGATTC
TCCTTCCACTTTCAACAATTCGCCGGCGGATCATCTGTTCGTCAATGGCCGTCTCTTGCCTCACTCTTTCCCGCCTCAGCCGATCGGTGTCTATACGGTCGACATTTCCC
GTCCGGCGAGCCGGACGAGCAGCGTCGGGAGTAAGGATTCGTTCATGTCGTCGAGAAGTAACAGCAGTAACAGTAGTTGCAGTAGCAGTACCAGCGCGAGAACGAGCGCG
AGCGATGTTGAGCGATCTTCGTCGAGATTCTCTTCGCATCAGATCAAGAGAGCGCAGAAATCTTCTTCGGTTTCCGCTCAGGTGTACGGATCCTCTCAGAGATGGCAGTT
CATCGCGTCGGTGCCGGTGCCGGCGACTCTGAGCCGCGAGAATTCGAGGAGGAAGAAGGCCGTGGAGAATATTGGGGGAAAATCGGATTCGAGGAGGAAGAAGAGGAGGA
CGGAGACGGCGACGGCGACGGCAACGGCGAGGAATAGGAGGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGTGGTTAGGAAGGAAGGTTTTCCGGTGGATT
ATACTGGTTTGTAAAGAATGCCATGCGATTGAGCCGTCGAGGAAGACGAAATCGACGATGCCGAAGCGCGAT

mRNA sequence

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Protein sequence

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METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRLLPHSFPPQPIGVYTVDISRPASRTSSVGSKDSFMSSRSNSSNSSCSSSTSARTSA
SDVERSSSRFSSHQIKRAQKSSSVSAQVYGSSQRWQFIASVPVPATLSRENSRRKKAVENIGGKSDSRRKKRRTETATATATARNRRKKKKKKKKKKKTMWLGRKVFRWI
ILVCKECHAIEPSRKTKSTMPKRD

MS021287 (gene) of Bitter gourd (TR) v1 genome