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MS021290 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021290
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationscaffold358:770962..771114
RNA-Seq ExpressionMS021290
SyntenyMS021290
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAS65721.1 ribosomal protein S7 [Kingia australis]6.5e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
AAX83293.1 ribosomal protein S7 [Medicago sativa]6.5e-1491.3Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAERH
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE H
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAERH
AEX94178.1 ribosomal protein S7 [Dichelostemma capitatum]8.5e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
YP_009249080.1 ribosomal protein S7 [Baxteria australis]6.5e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
YP_009861023.1 ribosomal protein S7 [Spatholobus suberectus]6.5e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
TrEMBL top hitse value%identityAlignment
A0A143FXQ2 Ribosomal protein S73.1e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
A0A6M8PLX9 30S ribosomal protein S7, chloroplastic3.1e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
A0ARS7 Ribosomal protein S73.1e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
M1JDT7 Ribosomal protein S73.1e-1495.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLGTSRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Q2VRR6 30S ribosomal protein S7, chloroplastic3.1e-1491.3Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAERH
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE H
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAERH
SwissProt top hitse value%identityAlignment
A4QJG0 30S ribosomal protein S7, chloroplastic3.2e-1693.18Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
A4QJP4 30S ribosomal protein S7, chloroplastic3.2e-1693.18Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Q67ID1 30S ribosomal protein S7, chloroplastic3.2e-1693.18Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Q67IP2 30S ribosomal protein S7, chloroplastic1.5e-1695.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Q6KGV8 30S ribosomal protein S7, chloroplastic1.5e-1695.45Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
Arabidopsis top hitse value%identityAlignment
ATCG00900.1 Ribosomal protein S7p/S5e family protein2.3e-1793.18Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
ATCG01240.1 ribosomal protein S72.3e-1793.18Show/hide
Query:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE
        WLLG SRKRPG+NMAFKLSSELVDAAKGSGDAIRKKEETH+MAE
Subjt:  WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTTATTAGGGACCTCCCGAAAACGTCCGGGTCAAAATATGGCTTTCAAATTAAGTTCTGAACTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGA
AGAGACTCATAAAATGGCAGAGCGTCATATGAACGGAACGAGA
mRNA sequenceShow/hide mRNA sequence
TGGTTATTAGGGACCTCCCGAAAACGTCCGGGTCAAAATATGGCTTTCAAATTAAGTTCTGAACTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGA
AGAGACTCATAAAATGGCAGAGCGTCATATGAACGGAACGAGA
Protein sequenceShow/hide protein sequence
WLLGTSRKRPGQNMAFKLSSELVDAAKGSGDAIRKKEETHKMAERHMNGTR