CuGenDBv2

Gene ID	MS021292
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	scaffold358:806863..806997
RNA-Seq Expression	MS021292
Synteny	MS021292
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

KAB2084478.1 hypothetical protein ES319_A05G336900v1 [Gossypium barbadense]

3.4e-14

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDV++CEPIL YL RGMEKI ENRTIIQYLPYVTHWDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

TYI30070.1 hypothetical protein ES332_A05G359000v1 [Gossypium tomentosum]

3.4e-14

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDV++CEPIL YL RGMEKI ENRTIIQYLPYVTHWDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

YP_008578229.1 NADH dehydrogenase subunit 7 [Stockwellia quadrifida]

3.4e-14

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRT+IQYLPYVTHWDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

YP_009270794.1 NdhH [Perilla citriodora]

5.7e-14

88.89

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVINCEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

YP_009577333.1 NADH dehydrogenase subunit H [Nymphoides coreana]

5.7e-14

88.89

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVINCEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

TrEMBL top hits

e value

%identity

Alignment

A0A0K0N8G7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.8e-14

88.89

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVINCEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

A0A1B0VH83 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.8e-14

88.89

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVINCEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

A0A5D2QRS9 Complex1_49kDa domain-containing protein

1.6e-14

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDV++CEPIL YL RGMEKI ENRTIIQYLPYVTHWDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

A0A5J5VW89 Complex1_49kDa domain-containing protein

1.6e-14

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDV++CEPIL YL RGMEKI ENRTIIQYLPYVTHWDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

T1QQG2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.6e-14

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRT+IQYLPYVTHWDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

SwissProt top hits

e value

%identity

Alignment

A1EA65 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.9e-16

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

A9LYF6 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.9e-16

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

B3TNA5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.9e-16

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

Q3V4X8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.9e-16

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

Q70XV8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.9e-16

86.67

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDVI+CEPIL YL RGMEKI ENRTIIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

1.0e-16

82.22

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Query:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE
        EDV++CEPIL YL RGMEKI ENR IIQYLPYVT WDYLAT+FTE
Subjt:  EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

Sequences

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CDS sequence

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GAAGATGTTATTAACTGTGAACCAATATTGGTTTATTTAGACAGAGGGATGGAAAAAATTACGGAAAACCGAACAATTATACAATATTTACCTTATGTAACACATTGGGA
TTATTTAGCTACTGTGTTCACAGAA

mRNA sequence

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GAAGATGTTATTAACTGTGAACCAATATTGGTTTATTTAGACAGAGGGATGGAAAAAATTACGGAAAACCGAACAATTATACAATATTTACCTTATGTAACACATTGGGA
TTATTTAGCTACTGTGTTCACAGAA

Protein sequence

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EDVINCEPILVYLDRGMEKITENRTIIQYLPYVTHWDYLATVFTE

MS021292 (gene) of Bitter gourd (TR) v1 genome