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MS021302 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021302
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase
Genome locationscaffold358:889969..890136
RNA-Seq ExpressionMS021302
SyntenyMS021302
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026044.1 hypothetical protein E6C27_scaffold581G00300 [Cucumis melo var. makuwa]2.3e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]3.9e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]3.9e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]3.9e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]1.9e-0645.28Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTI
        CP+S  VW  MI+ +GSSH +  W  EL W+C ++V +   R VW LAW+ T+
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTI

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932251.9e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

A0A5A7SK23 Uncharacterized protein1.1e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

A0A5A7UP65 Reverse transcriptase1.9e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

A0A5D3D7P6 Reverse transcriptase1.9e-0439.29Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI
        CPF  DVW  ++    SSH I  W +EL W+C   +     R++W + W  TIY I
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI

A0A6J1E271 uncharacterized protein LOC1110253249.1e-0745.28Show/hide
Query:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTI
        CP+S  VW  MI+ +GSSH +  W  EL W+C ++V +   R VW LAW+ T+
Subjt:  CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTCCTTTTAGTTTAGATGTATGGGGTGCTATGATTGCTTGTTCCGGCTCTTCGCATATTATTAGAGGTTGGTTCATGGAGCTTGATTGGGTTTGTTGTATCAGTGTAGC
CAATTATCCGCATCGTCGTGTGTGGTGGTTGGCTTGGTCGACGACTATTTATCATATT
mRNA sequenceShow/hide mRNA sequence
TGTCCTTTTAGTTTAGATGTATGGGGTGCTATGATTGCTTGTTCCGGCTCTTCGCATATTATTAGAGGTTGGTTCATGGAGCTTGATTGGGTTTGTTGTATCAGTGTAGC
CAATTATCCGCATCGTCGTGTGTGGTGGTTGGCTTGGTCGACGACTATTTATCATATT
Protein sequenceShow/hide protein sequence
CPFSLDVWGAMIACSGSSHIIRGWFMELDWVCCISVANYPHRRVWWLAWSTTIYHI