; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021310 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021310
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RMA3-like
Genome locationscaffold358:939418..940200
RNA-Seq ExpressionMS021310
SyntenyMS021310
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141226.1 E3 ubiquitin-protein ligase RMA3 [Cucumis sativus]2.2e-12685.88Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQ Y+ PEAY ESEQDVSLKQNWKSIS+Q T+S+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQA-YGDIATYTPSYLGNAVITSLLNPTIGMFG
        LYGRG SN+DSESKKSHLG+AVPRRPPPS +NT  +SN++S L+PSQ+LH NY RSPSHPIYHQQYFPQA YG+ A+Y+PSYLGNAVITSLLNPTIGMFG
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQA-YGDIATYTPSYLGNAVITSLLNPTIGMFG

Query:  ETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        ETVFTRIFGSVD NLLPY PYNNSI GN S+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  ETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_008452467.1 PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo]1.5e-12786.21Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQ Y+ PEAY ESEQDVSLKQNWKSIS++ T+S+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRG SN+DSESKKSHLG+AVPRRPPPS +NT   SN++SA +PSQ+LH NY RSPSHPIYHQQYFPQAYG+ A+Y PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGSVD NLLPYPPYNNSI GN S+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_022139659.1 E3 ubiquitin-protein ligase RMA3-like [Momordica charantia]4.2e-14999.62Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRGKSNTDSESKKSHLGVAVPRRPPPSA NTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_023521850.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo]7.4e-12281.61Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        M+QTY++PEAY ESEQDVSLKQNWKS+S+Q TVS+DA+GCFDCNICLDSAA+PVVTLCGHL+CWPCIYKW +VQISSNE EN  NCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRGKS +DSESKKSHLG+ VPRRPPPS +NT  +SNA SALHPS++LHPNY RSP H IYHQQYFPQAYG+ A Y PSYLGNA++TSLLNPTIG+ GE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TV+TRIFGS D NLLPYPPYN+S+ GN  +RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

XP_038899693.1 E3 ubiquitin-protein ligase RMA3 [Benincasa hispida]2.5e-13087.55Show/hide
Query:  MEQTYTTP----EAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPS
        MEQ Y+ P    EAY ESEQDVSLKQNWKSIS+Q TVS+DA+GCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWL+VQISSN PEN QNCPVCKASITPS
Subjt:  MEQTYTTP----EAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPS

Query:  SLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIG
        SLVPLYGRG SN+DSESKKSHLG+ VPRRPPPS +NT  +SNATSALHPSQ+LHPNY RSPSHPIYHQQYFPQAYGD A+Y PSYLGNAVITSLLNPTIG
Subjt:  SLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIG

Query:  MFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        MFGETVFTRIFGSVD NLLPYPPYNN+IPGN S+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  MFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

TrEMBL top hitse value%identityAlignment
A0A0A0KZN0 RING-type domain-containing protein1.1e-12685.88Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQ Y+ PEAY ESEQDVSLKQNWKSIS+Q T+S+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQA-YGDIATYTPSYLGNAVITSLLNPTIGMFG
        LYGRG SN+DSESKKSHLG+AVPRRPPPS +NT  +SN++S L+PSQ+LH NY RSPSHPIYHQQYFPQA YG+ A+Y+PSYLGNAVITSLLNPTIGMFG
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQA-YGDIATYTPSYLGNAVITSLLNPTIGMFG

Query:  ETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        ETVFTRIFGSVD NLLPY PYNNSI GN S+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  ETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A1S3BTX0 E3 ubiquitin-protein ligase RMA37.5e-12886.21Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQ Y+ PEAY ESEQDVSLKQNWKSIS++ T+S+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRG SN+DSESKKSHLG+AVPRRPPPS +NT   SN++SA +PSQ+LH NY RSPSHPIYHQQYFPQAYG+ A+Y PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGSVD NLLPYPPYNNSI GN S+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A5A7VD79 E3 ubiquitin-protein ligase RMA37.5e-12886.21Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQ Y+ PEAY ESEQDVSLKQNWKSIS++ T+S+DA+GCFDCNICLDSAA+PVVTLCGHLYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRG SN+DSESKKSHLG+AVPRRPPPS +NT   SN++SA +PSQ+LH NY RSPSHPIYHQQYFPQAYG+ A+Y PSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGSVD NLLPYPPYNNSI GN S+RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A6J1CDN1 E3 ubiquitin-protein ligase RMA3-like2.0e-14999.62Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRGKSNTDSESKKSHLGVAVPRRPPPSA NTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

A0A6J1FI46 E3 ubiquitin-protein ligase RMA3-like7.5e-12080.46Show/hide
Query:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP
        M+QTY++PEAY ESEQDVSLKQNWKS+S+Q TVS+DA+GCFDCNICLDSAA+PVVTLCGHL+CWPCIYKW +VQISS E EN  NCPVCKASITPSSLVP
Subjt:  MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVP

Query:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE
        LYGRGKS +DSESKKSHLG+ VPRRPPPS +NT  +SNA SALHPS++LHPNY RSP H IYHQQYFPQAYG+ A Y PSYLGNA++TSLLNPTIG+ GE
Subjt:  LYGRGKSNTDSESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE

Query:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
        TV+TRIFGS D +LLPYPPYN+ + GN  +RMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
Subjt:  TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA12.5e-4043.97Show/hide
Query:  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPS
        +DD++  FDCNICLDS  EPVVTLCGHL+CWPCI+KWL+VQ   +S+E +  + CPVCK+ ++ S+LVPLYGRG+  T  E K S     VP+RP  P  
Subjt:  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPS

Query:  AINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGS
         +   ++  A++ L  SQ +H N   SP      + Y+P + G +++ + SY      +++L+P + M GE V TR+FG+   +   YP   N + G   
Subjt:  AINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGS

Query:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
         RMRR+ MQ DKSL R+  F  CC ++CLLLF
Subjt:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

P93030 E3 ubiquitin-protein ligase RMA22.5e-2734.04Show/hide
Query:  DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ---------NCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP
        D+ G FDCNICLD   +PVVTLCGHL+CWPCI+KW     S+N  + V           CPVCK+ ++ ++LVP+YGRG+       K    G  VP R 
Subjt:  DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ---------NCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP

Query:  PPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPG
                                      P+ P+Y  +   Q  G+  +    Y        + +P +G+  E V+ R+FG   SN+ PY   N     
Subjt:  PPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPG

Query:  NGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
            R RR+ MQ ++SL+RV +FL C   +CL LF
Subjt:  NGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Q09463 E3 ubiquitin ligase rnf-59.4e-1942.59Show/hide
Query:  KSISSQPTVSD--DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAV
        K+ S +PT S   D    F+CNICLD+A + VV+LCGHL+CWPC+ +WL+ +       N Q CPVCK++I  + +VP+YGRG  ++D   K        
Subjt:  KSISSQPTVSD--DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAV

Query:  PRRPPPSA
           PPP +
Subjt:  PRRPPPSA

Q6R567 E3 ubiquitin-protein ligase RMA1H14.2e-4341.6Show/hide
Query:  WKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ--NCPVCKASITPSSLVPLYGR-GKSNTDSESKKSHLGV
        WKS++ +  V ++  G FDCNICLD   EPV+TLCGHLYCWPCIYKW+  Q  S+E  + Q   CPVCKA ++  +L+PLYGR G+S   SE K  +LG+
Subjt:  WKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ--NCPVCKASITPSSLVPLYGR-GKSNTDSESKKSHLGV

Query:  AVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNP--------TIGMFGETVFTRIFGSVDS
         +P+RPP             S       L P    +PS  +  + Y  Q+     T  P+Y G+ + + +L+P           M GE  + RIFG+  +
Subjt:  AVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNP--------TIGMFGETVFTRIFGSVDS

Query:  NLLPYP-PYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
         +  YP  YN +I  + S RMRRQ  Q D+SL R+  FLFCCF+ CL+LF
Subjt:  NLLPYP-PYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Q8GUK7 E3 ubiquitin-protein ligase RMA35.1e-4948.55Show/hide
Query:  SISSQPTVSD-DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISS-NEPENVQNCPVCKASITPSSLVPLYGRGKSNTDS---ESKKSHLGV
        ++++ PT    +  GCFDCNICLD+A +PVVTLCGHL+CWPCIYKWL+VQ+SS +  ++  NCPVCK++IT +SLVPLYGRG S+  S     K+  L  
Subjt:  SISSQPTVSD-DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISS-NEPENVQNCPVCKASITPSSLVPLYGRGKSNTDS---ESKKSHLGV

Query:  AVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY
         +PRRP PSA+   +   + S+L+PS     + T SPS   ++ QY P+ +    T   + L NAV+ S L P IGMFG+ V+TRIFG+  + +    PY
Subjt:  AVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY

Query:  NNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
                S RM    MQ +KSLNRVSIF  CC I+CLLLF
Subjt:  NNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Arabidopsis top hitse value%identityAlignment
AT1G74990.1 RING/U-box superfamily protein4.0e-2550Show/hide
Query:  SISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRR
        +I++     DDA   F CNICL+ A EP+VTLCGHL+CWPC+YKWL+    SN      +CPVCKA +   +LVPLYG GK ++D  SK +  GV VP R
Subjt:  SISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRR

Query:  PPPSAINT
        P  +   T
Subjt:  PPPSAINT

AT4G03510.1 RING membrane-anchor 11.8e-4143.97Show/hide
Query:  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPS
        +DD++  FDCNICLDS  EPVVTLCGHL+CWPCI+KWL+VQ   +S+E +  + CPVCK+ ++ S+LVPLYGRG+  T  E K S     VP+RP  P  
Subjt:  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPS

Query:  AINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGS
         +   ++  A++ L  SQ +H N   SP      + Y+P + G +++ + SY      +++L+P + M GE V TR+FG+   +   YP   N + G   
Subjt:  AINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGS

Query:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
         RMRR+ MQ DKSL R+  F  CC ++CLLLF
Subjt:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

AT4G03510.2 RING membrane-anchor 11.8e-4143.97Show/hide
Query:  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPS
        +DD++  FDCNICLDS  EPVVTLCGHL+CWPCI+KWL+VQ   +S+E +  + CPVCK+ ++ S+LVPLYGRG+  T  E K S     VP+RP  P  
Subjt:  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPS

Query:  AINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGS
         +   ++  A++ L  SQ +H N   SP      + Y+P + G +++ + SY      +++L+P + M GE V TR+FG+   +   YP   N + G   
Subjt:  AINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGS

Query:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
         RMRR+ MQ DKSL R+  F  CC ++CLLLF
Subjt:  SRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

AT4G27470.1 RING membrane-anchor 33.6e-5048.55Show/hide
Query:  SISSQPTVSD-DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISS-NEPENVQNCPVCKASITPSSLVPLYGRGKSNTDS---ESKKSHLGV
        ++++ PT    +  GCFDCNICLD+A +PVVTLCGHL+CWPCIYKWL+VQ+SS +  ++  NCPVCK++IT +SLVPLYGRG S+  S     K+  L  
Subjt:  SISSQPTVSD-DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISS-NEPENVQNCPVCKASITPSSLVPLYGRGKSNTDS---ESKKSHLGV

Query:  AVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY
         +PRRP PSA+   +   + S+L+PS     + T SPS   ++ QY P+ +    T   + L NAV+ S L P IGMFG+ V+TRIFG+  + +    PY
Subjt:  AVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY

Query:  NNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
                S RM    MQ +KSLNRVSIF  CC I+CLLLF
Subjt:  NNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

AT4G28270.1 RING membrane-anchor 21.8e-2834.04Show/hide
Query:  DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ---------NCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP
        D+ G FDCNICLD   +PVVTLCGHL+CWPCI+KW     S+N  + V           CPVCK+ ++ ++LVP+YGRG+       K    G  VP R 
Subjt:  DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ---------NCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP

Query:  PPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPG
                                      P+ P+Y  +   Q  G+  +    Y        + +P +G+  E V+ R+FG   SN+ PY   N     
Subjt:  PPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPG

Query:  NGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF
            R RR+ MQ ++SL+RV +FL C   +CL LF
Subjt:  NGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAACCTACACCACGCCCGAGGCATACTTTGAGTCTGAACAAGATGTGTCTCTCAAACAAAACTGGAAATCCATCTCATCACAGCCAACAGTCTCAGACGATGC
GCACGGTTGCTTCGATTGCAACATTTGCTTAGACTCGGCAGCGGAGCCTGTCGTCACCCTCTGTGGTCACCTCTACTGCTGGCCATGCATTTACAAGTGGCTTAACGTAC
AAATCTCCAGCAATGAACCTGAGAACGTGCAGAACTGCCCCGTTTGTAAGGCTAGCATCACCCCCTCCTCTTTAGTTCCCCTCTATGGCCGTGGCAAGTCGAACACGGAT
TCTGAATCCAAGAAGTCTCACTTGGGTGTGGCTGTGCCTCGAAGGCCACCGCCATCTGCAATTAACACACTGCACAATTCCAATGCAACCTCTGCATTGCATCCAAGCCA
GGACCTCCATCCAAATTACACCCGCTCACCCTCGCACCCGATCTATCACCAACAATACTTCCCCCAGGCCTATGGTGACATTGCGACATACACACCGTCTTATCTGGGTA
ATGCCGTGATAACAAGTCTGTTAAACCCAACGATTGGGATGTTTGGAGAAACGGTTTTCACGAGAATTTTCGGTAGCGTGGATTCGAACTTGTTGCCATACCCGCCTTAC
AACAACTCCATCCCAGGAAATGGAAGTAGCAGAATGAGAAGGCAGGAAATGCAGCTTGATAAGTCTCTTAATAGAGTTTCAATATTTCTATTTTGCTGCTTTATTATCTG
CCTTCTGTTGTTT
mRNA sequenceShow/hide mRNA sequence
ATGGAACAAACCTACACCACGCCCGAGGCATACTTTGAGTCTGAACAAGATGTGTCTCTCAAACAAAACTGGAAATCCATCTCATCACAGCCAACAGTCTCAGACGATGC
GCACGGTTGCTTCGATTGCAACATTTGCTTAGACTCGGCAGCGGAGCCTGTCGTCACCCTCTGTGGTCACCTCTACTGCTGGCCATGCATTTACAAGTGGCTTAACGTAC
AAATCTCCAGCAATGAACCTGAGAACGTGCAGAACTGCCCCGTTTGTAAGGCTAGCATCACCCCCTCCTCTTTAGTTCCCCTCTATGGCCGTGGCAAGTCGAACACGGAT
TCTGAATCCAAGAAGTCTCACTTGGGTGTGGCTGTGCCTCGAAGGCCACCGCCATCTGCAATTAACACACTGCACAATTCCAATGCAACCTCTGCATTGCATCCAAGCCA
GGACCTCCATCCAAATTACACCCGCTCACCCTCGCACCCGATCTATCACCAACAATACTTCCCCCAGGCCTATGGTGACATTGCGACATACACACCGTCTTATCTGGGTA
ATGCCGTGATAACAAGTCTGTTAAACCCAACGATTGGGATGTTTGGAGAAACGGTTTTCACGAGAATTTTCGGTAGCGTGGATTCGAACTTGTTGCCATACCCGCCTTAC
AACAACTCCATCCCAGGAAATGGAAGTAGCAGAATGAGAAGGCAGGAAATGCAGCTTGATAAGTCTCTTAATAGAGTTTCAATATTTCTATTTTGCTGCTTTATTATCTG
CCTTCTGTTGTTT
Protein sequenceShow/hide protein sequence
MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTD
SESKKSHLGVAVPRRPPPSAINTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY
NNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF