; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021312 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021312
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold358:950359..950943
RNA-Seq ExpressionMS021312
SyntenyMS021312
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591970.1 hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3346.96Show/hide
Query:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLK----GGMPKFSSVGPISGDCCNYGSNCGQN---GYGCPPSYG
        MAV++N FLVGL  FLCLSL+SA+RVLK +DAE  +  N++ S  D QL   ++A LK    G +PK SSVG   GDC   G NCG +   GY  PP+YG
Subjt:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLK----GGMPKFSSVGPISGDCCNYGSNCGQN---GYGCPPSYG

Query:  CGGGN------CGGGNSGCQSCGGGNSGGGCYSCPPCQWQ--------------------GCQGCQGSPPPCGCEF-RIDNSKVQDES-TVTSEPDPPSI
         GGG+       GGG+SGCQ          CY+  PC WQ                    GCQGCQ   PPC  E   +++SK+QDES  +  EP+PP  
Subjt:  CGGGN------CGGGNSGCQSCGGGNSGGGCYSCPPCQWQ--------------------GCQGCQGSPPPCGCEF-RIDNSKVQDES-TVTSEPDPPSI

Query:  VDVPQVQPENHNKKSSGGANQDRKSNGGMV
             V PENH+ KSSGGANQD KSNGG+V
Subjt:  VDVPQVQPENHNKKSSGGANQDRKSNGGMV

KAG6607873.1 hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2344.5Show/hide
Query:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGL-----KGGMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCG
        MAV+++  LV L + LCLS +SA+RVLK +D+EN    N +  G + +L    HA L     +G +PKF S      DCCN+G++ G  GY CPP++ C 
Subjt:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGL-----KGGMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCG

Query:  GGNCGGGNSGCQSCGGGNSGGGCYSCPPCQWQGCQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKKSSGGANQDRKSNGGMV
             G NSGC+           YSC PCQW         PPPCGC      S VQ ES  TSE D     +VP V+P NHN K SGGANQ+ KSNGG+V
Subjt:  GGNCGGGNSGCQSCGGGNSGGGCYSCPPCQWQGCQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKKSSGGANQDRKSNGGMV

KGN55137.1 hypothetical protein Csa_012773 [Cucumis sativus]1.9e-3748.61Show/hide
Query:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLKG----GMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCGG
        MAV+    LVGL  FLCLSL SA+R+LK +DAEN +  +D+PSG +     ++H  LK      M K SS+ PI+GDCC+YG+NC   G   PP+ GCGG
Subjt:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLKG----GMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCGG

Query:  -GNC----GGGNSGCQSCGGGNSGGG------CYSCPPCQWQG------CQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKK
         G C    GGG  GC  C GG  GGG      C +C  CQWQG      CQGCQG    CGC+  +D+SKV+ +S  T EP  P +  VP  +P +++ K
Subjt:  -GNC----GGGNSGCQSCGGGNSGGG------CYSCPPCQWQG------CQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKK

Query:  SSGGANQDRKSNGGMV
        SSGG+NQD KSNGG+V
Subjt:  SSGGANQDRKSNGGMV

XP_023535133.1 mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo]1.7e-3047.81Show/hide
Query:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLK----GGMPKFSSVGPISGDCCNYGSNCGQN---GYGCPPSYG
        MAV+++ FLVGL  FLCLSL+SA+RVLK +DAE  + +N++ S  D QL   ++A LK    G +PK SSVG   GDC   G NCG +   GY  PP+YG
Subjt:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLK----GGMPKFSSVGPISGDCCNYGSNCGQN---GYGCPPSYG

Query:  CGGGN------CGGGNSGCQSC---------------GGGNSGGGCYSCP-PCQ--WQGCQGCQGSPPPCGCEF-RIDNSKVQDES-TVTSEPDPPSIVD
         GGG+       GGG+SGCQ C               G     GGC  C   CQ    GCQGCQ   PPC  E   +++SK+QDES  +  EP+PP    
Subjt:  CGGGN------CGGGNSGCQSC---------------GGGNSGGGCYSCP-PCQ--WQGCQGCQGSPPPCGCEF-RIDNSKVQDES-TVTSEPDPPSIVD

Query:  VPQVQPENHNKKSSGGANQDRKSNGGMV
           V PENH+ KSSGGANQD KSNGG+V
Subjt:  VPQVQPENHNKKSSGGANQDRKSNGGMV

TrEMBL top hitse value%identityAlignment
A0A0A0L3F6 Uncharacterized protein9.2e-3848.61Show/hide
Query:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLKG----GMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCGG
        MAV+    LVGL  FLCLSL SA+R+LK +DAEN +  +D+PSG +     ++H  LK      M K SS+ PI+GDCC+YG+NC   G   PP+ GCGG
Subjt:  MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLKG----GMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCGG

Query:  -GNC----GGGNSGCQSCGGGNSGGG------CYSCPPCQWQG------CQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKK
         G C    GGG  GC  C GG  GGG      C +C  CQWQG      CQGCQG    CGC+  +D+SKV+ +S  T EP  P +  VP  +P +++ K
Subjt:  -GNC----GGGNSGCQSCGGGNSGGG------CYSCPPCQWQG------CQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKK

Query:  SSGGANQDRKSNGGMV
        SSGG+NQD KSNGG+V
Subjt:  SSGGANQDRKSNGGMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAGAAAATGGTTTCTTGGTTGGTCTCTTTGTGTTTCTCTGCCTGAGCCTCACCTCTGCCCATCGAGTTCTTAAGGGCAGCGACGCTGAAAATGGGATGAC
AGCTAATGATTTACCTTCTGGGCATGACGAACAACTGCTCGGTACCAGCCATGCTGGTCTGAAAGGTGGCATGCCGAAGTTCAGTTCTGTTGGTCCAATCAGTGGTGATT
GCTGCAACTATGGCAGCAATTGTGGGCAGAATGGATACGGGTGTCCTCCAAGCTATGGATGTGGTGGGGGTAACTGTGGTGGTGGCAACTCCGGTTGTCAATCCTGCGGT
GGCGGTAACAGTGGTGGTGGCTGCTACTCTTGTCCACCGTGCCAATGGCAGGGATGCCAAGGATGCCAGGGATCGCCTCCGCCCTGTGGCTGCGAATTCCGCATTGATAA
CTCTAAGGTGCAAGATGAGTCTACTGTAACGTCTGAACCTGATCCACCTTCTATTGTAGATGTTCCACAAGTCCAGCCAGAAAATCATAACAAAAAATCCAGTGGGGGAG
CAAACCAGGACAGGAAATCCAATGGGGGTATGGTT
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTCAGAAAATGGTTTCTTGGTTGGTCTCTTTGTGTTTCTCTGCCTGAGCCTCACCTCTGCCCATCGAGTTCTTAAGGGCAGCGACGCTGAAAATGGGATGAC
AGCTAATGATTTACCTTCTGGGCATGACGAACAACTGCTCGGTACCAGCCATGCTGGTCTGAAAGGTGGCATGCCGAAGTTCAGTTCTGTTGGTCCAATCAGTGGTGATT
GCTGCAACTATGGCAGCAATTGTGGGCAGAATGGATACGGGTGTCCTCCAAGCTATGGATGTGGTGGGGGTAACTGTGGTGGTGGCAACTCCGGTTGTCAATCCTGCGGT
GGCGGTAACAGTGGTGGTGGCTGCTACTCTTGTCCACCGTGCCAATGGCAGGGATGCCAAGGATGCCAGGGATCGCCTCCGCCCTGTGGCTGCGAATTCCGCATTGATAA
CTCTAAGGTGCAAGATGAGTCTACTGTAACGTCTGAACCTGATCCACCTTCTATTGTAGATGTTCCACAAGTCCAGCCAGAAAATCATAACAAAAAATCCAGTGGGGGAG
CAAACCAGGACAGGAAATCCAATGGGGGTATGGTT
Protein sequenceShow/hide protein sequence
MAVSENGFLVGLFVFLCLSLTSAHRVLKGSDAENGMTANDLPSGHDEQLLGTSHAGLKGGMPKFSSVGPISGDCCNYGSNCGQNGYGCPPSYGCGGGNCGGGNSGCQSCG
GGNSGGGCYSCPPCQWQGCQGCQGSPPPCGCEFRIDNSKVQDESTVTSEPDPPSIVDVPQVQPENHNKKSSGGANQDRKSNGGMV