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MS021321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationscaffold358:1026881..1028403
RNA-Seq ExpressionMS021321
SyntenyMS021321
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139354.1 uncharacterized protein LOC111010304 [Momordica charantia]4.5e-97100Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

XP_022935762.1 uncharacterized protein LOC111442584 [Cucurbita moschata]1.6e-8687.5Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKL+LIIV+V+DVIAF LAVAAEQRRSTA VV D E  +NYCVYDSDISTGYGVGAFLLLMASQ +IM ASRCFCCGKSL+PGGSRAWAIILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGS+RNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

XP_022976585.1 uncharacterized protein LOC111476938 [Cucurbita maxima]1.6e-8687.5Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKL+LIIV+V+DVIAF LAVAAEQRRSTA VV D E  +NYCVYDSD+STGYGVGAFLLLMASQ +IM ASRCFCCGKSL+PGGSRAWAIILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGSVRNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

XP_031740219.1 uncharacterized protein LOC101208795 [Cucumis sativus]2.2e-8889.67Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKLILIIV V+D+IAF LAVAAEQRRSTA VVQDKE E+NYCVYDSDISTGYGVGAFLLLMASQ +IMAASRCFCCGKSL+PGGSRAWA+ILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGSVRNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

XP_038900268.1 uncharacterized protein LOC120087350 [Benincasa hispida]4.9e-8889.67Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKLILIIV V+DVIAF LAVAAEQRRSTA VVQDKE E+NYCVYDSDISTGYGVGAFLLLMASQ +IM ASRCFCCGKSL+PGGSRAWA+ILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGSVRNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

TrEMBL top hitse value%identityAlignment
A0A0A0L071 Fiber protein Fb341.1e-8889.67Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKLILIIV V+D+IAF LAVAAEQRRSTA VVQDKE E+NYCVYDSDISTGYGVGAFLLLMASQ +IMAASRCFCCGKSL+PGGSRAWA+ILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGSVRNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

A0A5A7VBE4 DUF1218 domain-containing protein2.9e-8688.04Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKLILIIV V+DVIAF LAVAAEQRRSTA VVQDKE ++NYCVYDSD+STGYGVGAFLLLMASQ +IMAASRCFCCGKSL+PGGSRA A+ILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGSVRNAYHTKYRT+F D+PPSC+TLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

A0A6J1CCQ4 uncharacterized protein LOC1110103042.2e-97100Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

A0A6J1F6H9 uncharacterized protein LOC1114425847.7e-8787.5Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKL+LIIV+V+DVIAF LAVAAEQRRSTA VV D E  +NYCVYDSDISTGYGVGAFLLLMASQ +IM ASRCFCCGKSL+PGGSRAWAIILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGS+RNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

A0A6J1IJW2 uncharacterized protein LOC1114769387.7e-8787.5Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKL+LIIV+V+DVIAF LAVAAEQRRSTA VV D E  +NYCVYDSD+STGYGVGAFLLLMASQ +IM ASRCFCCGKSL+PGGSRAWAIILFIICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK
        FFFIAEVCL AGSVRNAYHTKYRT+F D+PPSCQTLRKGVFGAGAAFIF NAIVS+LYY+FYSKARES LPYGGETGVGMGTYK
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13380.1 Protein of unknown function (DUF1218)5.7e-4246.71Show/hide
Query:  ASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWVF
        AS L+ I+V+ + ++AF  ++AAE+RRS  K +QD      +CVYDSD++TGYGVGAFL L++S+ ++M+ ++C C G+ L PG  RAW+II FI  W+ 
Subjt:  ASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWVF

Query:  FFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARES
        F +AE C++AG+ +NAYHTKY    S    SC +LRKG+F AGA FI    +++  YY++++K+  S
Subjt:  FFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARES

AT1G52910.1 Protein of unknown function (DUF1218)1.4e-5966.07Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKL++IIV ++D+IA  LA+AAEQRRS  KVV D E E  +C Y SDI+T YG GAF+LL  SQ +IM ASRCFCCGK+L PGGSRA  I+LF+ICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFS-DDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARE
        FF IAEVCLLAGS+RNAYHT YR +++ ++PPSC+ +RKGVF AGA+F  F AIVS+ YYI YS+AR+
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFS-DDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARE

AT1G61065.1 Protein of unknown function (DUF1218)4.8e-5764.67Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MAS L+L++V V D+IAF LAVAAEQRR+T ++ ++   + +YCVYD DI+TG GVG+FL+L+ASQ +IM ASRC CCG++L P GSR+WAI LFI  WV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARE
        FFFIA+VCLLAGSVRNAYHTKYR  F +  PSC++LRKGVFGAGAAFI    IVS+LYY+  S+A++
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARE

AT3G15480.1 Protein of unknown function (DUF1218)3.8e-6266.86Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASKL++IIV ++D+IA  LA+AAEQRRS  KV  D++ +++YCVY +DI+T YG GAF+LL  SQ +IMAASRCFCCGKSLNPGGSRA AIILF+ICWV
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFS-DDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARES
        FF IAE+CLLA S+RNAYHT+YR ++  +DPPSC+ +RKGVF AGAAF  F AIVS+ YY+ YS+AR++
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFS-DDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARES

AT4G27435.1 Protein of unknown function (DUF1218)1.8e-6772.83Show/hide
Query:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV
        MASK++  IV V ++IAF LAVAAEQRRSTA+VVQD EV++NYCVYDSD +TGYGVGAFL  +ASQ +IM  SRCFCCGK L PGGSRA A+ILFI+ W+
Subjt:  MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWV

Query:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFY-SKARESLLPY
        FF IAE+CLLAGSV NAYHTKYRT+F D+PP CQTLRKGVF AGA+F+FFNAIVS+ YY FY S A  SL PY
Subjt:  FFFIAEVCLLAGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFY-SKARESLLPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAATTGATTCTGATTATAGTTTTGGTAATCGACGTTATTGCTTTTGCTCTGGCTGTTGCCGCTGAGCAAAGAAGAAGCACTGCCAAGGTTGTGCAAGATAA
AGAAGTGGAGCACAACTATTGTGTGTACGACTCAGACATCTCGACGGGCTATGGCGTCGGTGCTTTTCTACTACTCATGGCGAGCCAGGGCGTGATAATGGCAGCTAGTC
GATGCTTTTGTTGCGGGAAGTCGTTGAATCCTGGAGGTTCAAGGGCCTGGGCTATTATCCTATTCATAATCTGCTGGGTGTTTTTCTTCATCGCCGAGGTTTGCTTGTTG
GCGGGGTCGGTAAGGAACGCCTACCACACCAAGTACCGAACCTTGTTCAGCGACGATCCTCCCTCGTGCCAAACTTTGAGGAAGGGAGTTTTTGGTGCAGGTGCAGCCTT
CATTTTCTTCAATGCCATTGTATCTAAACTCTACTATATATTCTACTCCAAGGCCAGAGAAAGCCTACTTCCATACGGCGGAGAAACTGGCGTCGGGATGGGAACCTACA
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAATTGATTCTGATTATAGTTTTGGTAATCGACGTTATTGCTTTTGCTCTGGCTGTTGCCGCTGAGCAAAGAAGAAGCACTGCCAAGGTTGTGCAAGATAA
AGAAGTGGAGCACAACTATTGTGTGTACGACTCAGACATCTCGACGGGCTATGGCGTCGGTGCTTTTCTACTACTCATGGCGAGCCAGGGCGTGATAATGGCAGCTAGTC
GATGCTTTTGTTGCGGGAAGTCGTTGAATCCTGGAGGTTCAAGGGCCTGGGCTATTATCCTATTCATAATCTGCTGGGTGTTTTTCTTCATCGCCGAGGTTTGCTTGTTG
GCGGGGTCGGTAAGGAACGCCTACCACACCAAGTACCGAACCTTGTTCAGCGACGATCCTCCCTCGTGCCAAACTTTGAGGAAGGGAGTTTTTGGTGCAGGTGCAGCCTT
CATTTTCTTCAATGCCATTGTATCTAAACTCTACTATATATTCTACTCCAAGGCCAGAGAAAGCCTACTTCCATACGGCGGAGAAACTGGCGTCGGGATGGGAACCTACA
AA
Protein sequenceShow/hide protein sequence
MASKLILIIVLVIDVIAFALAVAAEQRRSTAKVVQDKEVEHNYCVYDSDISTGYGVGAFLLLMASQGVIMAASRCFCCGKSLNPGGSRAWAIILFIICWVFFFIAEVCLL
AGSVRNAYHTKYRTLFSDDPPSCQTLRKGVFGAGAAFIFFNAIVSKLYYIFYSKARESLLPYGGETGVGMGTYK