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MS021330 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021330
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAC domain protein
Genome locationscaffold358:1116827..1117078
RNA-Seq ExpressionMS021330
SyntenyMS021330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]5.1e-2469.79Show/hide
Query:  MPTIFEQQP---------GRRS--NRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF+ QP         GR +   R  RSTCRSLSFGG++RG RNL A  GD+CRRNQGSREVLRRAL PPSRRPTLRW+NFRPTPSRLS MS A
Subjt:  MPTIFEQQP---------GRRS--NRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2267.01Show/hide
Query:  MPTIF--EQQPGRRSNRGG-----------RSTCRSLSFGGVLRGARNLTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF  +QQP  R +  G           RS CRSLSFGGV RG RN+TAAGDK RR QG RE+LRRAL PP+RRPTLRWLNFR TPSRLSNMS A
Subjt:  MPTIF--EQQPGRRSNRGG-----------RSTCRSLSFGGVLRGARNLTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2264.95Show/hide
Query:  MPTIFEQQP------------GRRSNRGGRSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF+ QP            GR  +R  RSTCRS SF G++R  RN +TA GDK RRNQG REVLRRAL PP+R+PTLRWLNFRPTPSRLSNMS A
Subjt:  MPTIFEQQP------------GRRSNRGGRSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]5.1e-2468.75Show/hide
Query:  MPTIFEQQPGRR-----------SNRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF+ QP  R            NR  RSTCRS SFGG++RG RNL A  GD+CRRNQGSREVLRRAL PPSRRPTLRW+NFRPTPSRLS MS A
Subjt:  MPTIFEQQPGRR-----------SNRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]5.1e-2468.75Show/hide
Query:  MPTIFEQQPGRR-----------SNRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF+ QP  R            NR  RSTCRS SFGG++RG RNL A  GD+CRRNQGSREVLRRAL PPSRRPTLRW+NFRPTPSRLS MS A
Subjt:  MPTIFEQQPGRR-----------SNRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

TrEMBL top hitse value%identityAlignment
A0A0A0LD23 Uncharacterized protein2.5e-2468.75Show/hide
Query:  MPTIFEQQPGRR-----------SNRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF+ QP  R            NR  RSTCRS SFGG++RG RNL A  GD+CRRNQGSREVLRRAL PPSRRPTLRW+NFRPTPSRLS MS A
Subjt:  MPTIFEQQPGRR-----------SNRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

A0A4U5P590 Uncharacterized protein3.5e-1058.82Show/hide
Query:  RSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        RSTC   +  G +R +++      DK RRNQ + E+LRRALAPP+RR TLRW NF+PTPSRLSNMS A
Subjt:  RSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

A0A5A7T5L7 Uncharacterized protein2.5e-2469.79Show/hide
Query:  MPTIFEQQP---------GRRS--NRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        MPTIF+ QP         GR +   R  RSTCRSLSFGG++RG RNL A  GD+CRRNQGSREVLRRAL PPSRRPTLRW+NFRPTPSRLS MS A
Subjt:  MPTIFEQQP---------GRRS--NRGGRSTCRSLSFGGVLRGARNLTA-AGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

A0A6N2MHB8 Uncharacterized protein4.1e-1148.96Show/hide
Query:  MPTIFEQQPG-----RRSNR------GGRSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        +P    Q PG     RR+N+      G RSTC   +  G +R +++      D+ RR+Q +RE+LRRALAPP+RR TLRW NF+PTPSRLSNMS A
Subjt:  MPTIFEQQPG-----RRSNR------GGRSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

B9N1L2 Uncharacterized protein3.5e-1058.82Show/hide
Query:  RSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA
        RSTC   +  G +R +++      DK RRNQ + E+LRRALAPP+RR TLRW NF+PTPSRLSNMS A
Subjt:  RSTCRSLSFGGVLRGARN-LTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein1.7e-0974.36Show/hide
Query:  RRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMS
        + + GSREVLRRAL PP RR  LRWLNFRPTPSRL  MS
Subjt:  RRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAATCTTCGAACAGCAGCCTGGCCGGAGGTCTAACCGCGGCGGCAGATCCACTTGCAGGAGCTTGAGTTTTGGGGGGGTGCTTAGGGGTGCCCGGAATTTGAC
GGCGGCCGGAGACAAGTGCCGGCGGAATCAGGGGAGCAGAGAGGTGTTGCGAAGGGCGTTGGCGCCGCCGAGCCGGAGACCCACTCTCCGGTGGCTCAATTTCCGGCCCA
CTCCCAGTCGCCTTTCGAATATGTCCAAGGCT
mRNA sequenceShow/hide mRNA sequence
ATGCCTACAATCTTCGAACAGCAGCCTGGCCGGAGGTCTAACCGCGGCGGCAGATCCACTTGCAGGAGCTTGAGTTTTGGGGGGGTGCTTAGGGGTGCCCGGAATTTGAC
GGCGGCCGGAGACAAGTGCCGGCGGAATCAGGGGAGCAGAGAGGTGTTGCGAAGGGCGTTGGCGCCGCCGAGCCGGAGACCCACTCTCCGGTGGCTCAATTTCCGGCCCA
CTCCCAGTCGCCTTTCGAATATGTCCAAGGCT
Protein sequenceShow/hide protein sequence
MPTIFEQQPGRRSNRGGRSTCRSLSFGGVLRGARNLTAAGDKCRRNQGSREVLRRALAPPSRRPTLRWLNFRPTPSRLSNMSKA