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MS021345 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021345
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDynein light chain
Genome locationscaffold358:1247409..1248498
RNA-Seq ExpressionMS021345
SyntenyMS021345
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4583.78Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ    
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
          F A E LKG
Subjt:  DQFAALEALKG

XP_022139644.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]7.9e-57100Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
        DQFAALEALKG
Subjt:  DQFAALEALKG

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]6.3e-4684.68Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ    
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
          FAA E LKG
Subjt:  DQFAALEALKG

XP_022981659.1 dynein light chain 2, cytoplasmic-like [Cucurbita maxima]3.1e-4583.78Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ    
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
           AA E LKG
Subjt:  DQFAALEALKG

XP_023525676.1 dynein light chain 2, cytoplasmic-like [Cucurbita pepo subsp. pepo]1.6e-4481.98Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAI+GETDMLQ MQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ    
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
          F A + LKG
Subjt:  DQFAALEALKG

TrEMBL top hitse value%identityAlignment
A0A072TRW8 Dynein light chain9.8e-4580.91Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKA+IGETDMLQ MQQDALDLA KALD +DVTEA DIARFIKKEFDR+HGPGWQCIVGTDFGSFVTHC GCFIYFC+G++A+LLF+GSAGPQ  E  
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALK
        +QF+A+EA K
Subjt:  DQFAALEALK

A0A1S3TIQ6 Dynein light chain2.9e-4481.82Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKA+IGETDMLQ MQQDA+DLA+KALD FDVTEA +IARFIKKEFDR+HGPGWQCIVGTDFGSFVTHC GCFIYFC+GNLA+LLFRGSA P+  E  
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALK
        +QF+ALEA K
Subjt:  DQFAALEALK

A0A6J1CDL8 Dynein light chain3.8e-57100Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
        DQFAALEALKG
Subjt:  DQFAALEALKG

A0A6J1FSQ1 Dynein light chain3.0e-4684.68Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ    
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
          FAA E LKG
Subjt:  DQFAALEALKG

A0A6J1J2G7 Dynein light chain1.5e-4583.78Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ    
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPT

Query:  DQFAALEALKG
           AA E LKG
Subjt:  DQFAALEALKG

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm5.2e-1953.93Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR
        M E KA+I   DM + MQQDA+D A +AL+ F++ +  DIA +IKKEFD+ + P W CIVG +FGS+VTH    FIYF +G +AVLLF+
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR

O96860 Dynein light chain 2, cytoplasmic1.5e-1851.69Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR
        M + KA+I   DM + MQQDA+D A +AL+ +++ +  DIA FIKKEFD+ + P W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR

Q22799 Dynein light chain 1, cytoplasmic1.5e-1850.56Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR
        M++ KA+I   DM   MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ + P W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR

Q24117 Dynein light chain 1, cytoplasmic3.4e-1850.56Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR
        M + KA+I   DM + MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ + P W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR

Q39580 Dynein 8 kDa light chain, flagellar outer arm3.4e-1852.94Show/hide
Query:  KAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR
        KA+I   DM + MQ DA+D A +AL+ +++ +  DIA +IKKEFDR H P W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  KAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.2e-2151.06Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGP
        MLEGKA++ ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  +G GWQC+VG++FG F TH  G FIYF +  L  L+F+G++ P
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGP

AT3G16120.1 Dynein light chain type 1 family protein8.0e-2354.95Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGS
        MLEGKA + ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  +G GWQC+VGT+FG F TH  G FIYF +G L  L+F+G+
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGS

AT4G15930.1 Dynein light chain type 1 family protein7.2e-1647.06Show/hide
Query:  KAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR
        +A+I   DM   MQ++A+++A  A + + V +  DIA  IKKEFD+ HG  W CIVG +FGS+VTH    F+YF +   AVLLF+
Subjt:  KAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFR

AT4G27360.1 Dynein light chain type 1 family protein4.8e-3674.19Show/hide
Query:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAG
        MLEGKA++G+TDM Q M++DAL LA+KALD FDVTE T IARFIKKEFDR +G GWQCIVGT FGSFVTHC GCFI+F VG+L +LLF+GS G
Subjt:  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAG

AT5G20110.1 Dynein light chain type 1 family protein9.5e-1649.4Show/hide
Query:  DMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGP
        DM   MQ  A   A   LDS +   +  +A  +KKEFD+ +GP W CIVG+ FGSFVTH  GCFIYF +  L VLLF+    P
Subjt:  DMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGTAAAGCAATAATCGGAGAGACGGATATGTTGCAGGGGATGCAGCAGGACGCGCTGGACCTTGCGGCTAAGGCCCTCGACAGCTTCGATGTCACTGAAGC
CACAGATATTGCTCGTTTCATTAAAAAGGAATTTGACAGGATACATGGGCCAGGATGGCAATGCATAGTGGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGGT
GCTTCATCTATTTTTGTGTTGGAAACCTTGCAGTTTTGCTCTTTAGAGGCTCTGCAGGCCCACAACAAACTGAGCCTACTGATCAGTTTGCTGCTTTGGAGGCTCTCAAA
GGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGGTAAAGCAATAATCGGAGAGACGGATATGTTGCAGGGGATGCAGCAGGACGCGCTGGACCTTGCGGCTAAGGCCCTCGACAGCTTCGATGTCACTGAAGC
CACAGATATTGCTCGTTTCATTAAAAAGGAATTTGACAGGATACATGGGCCAGGATGGCAATGCATAGTGGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGGT
GCTTCATCTATTTTTGTGTTGGAAACCTTGCAGTTTTGCTCTTTAGAGGCTCTGCAGGCCCACAACAAACTGAGCCTACTGATCAGTTTGCTGCTTTGGAGGCTCTCAAA
GGA
Protein sequenceShow/hide protein sequence
MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALK
G